Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p24110 Brassica napus
Aa31LG11G15190 Aethionema arabicum
Actinidia33329 Actinidia chinensis
Ah.12g055220 Amaranthus hybridus
AL6G25130 Arabidopsis lyrata
Aqoxy3G01286 Aquilegia oxysepala
Aqoxy5G03689 Aquilegia oxysepala
Aqoxy7G03797 Aquilegia oxysepala
AT5G14410 Arabidopsis thaliana
ATR0199G042 Amborella trichopoda
Atru.chr6.2441 Acer truncatum
Atru.chr9.2613 Acer truncatum
BcaB08g36986 Brassica carinata
BolC9t59112H Brassica oleracea
BraA10t44476Z Brassica rapa
C09p62750 Brassica napus
CAN.G473.34 Capsicum annuum
CARHR198900 Cardamine hirsuta
Carub.0006s1259 Capsella rubella
Ca_06610_v3 Cicer arietinum L.
Ca_30679_v3 Cicer arietinum L.
Ca_30727_v3 Cicer arietinum L.
Cc02_g32290 Coffea canephora
Cfa007330 Carpinus fangiana
Ciclev10017118m.g Citrus clementina
Ciclev10022926m.g Citrus clementina
CiPaw.03G046500 Carya illinoinensis
CiPaw.04G030100 Carya illinoinensis
CiPaw.11G015200 Carya illinoinensis
ClCG09G019420 Citrullus lanatus
COL.COLO4_30221 Corchorus olitorius
Cpa.g.sc130.72 Carica papaya
CsaV3_5G026960 Cucumis sativus L.
CSS0008661 Camellia sinensis var. sinensis
DCAR_015066 Daucus carota
Dinv33417 Davidia involucrata
Duzib187G0331 Durio zibethinus
ECA246G1504 Erigeron canadensis
EL10Ac5g12075 Beta vulgaris
Eucgr.I01721 Eucalyptus grandis
FAN02G1968 Fragaria x ananassa
FAN05G3275 Fragaria x ananassa
FAN09G0682 Fragaria x ananassa
FAN14G0692 Fragaria x ananassa
FvH4_6g51980 Fragaria vesca
Glyma.05G042900 Glycine max
Glyma.05G115500 Glycine max
Glyma.16G068200 Glycine max
Glyma.19G051600 Glycine max
Glyma.19G078800 Glycine max
Gohir.A07G055400 Gossypium hirsutum
Gohir.A09G030400 Gossypium hirsutum
Gohir.D07G059700 Gossypium hirsutum
Gohir.D09G030000 Gossypium hirsutum
Gorai.001G063200 Gossypium raimondii
Gorai.006G035000 Gossypium raimondii
Haze_14767 Corylus avellana
Hma1.2p1_0818F.1_g223340 Hydrangea macrophylla
Lalb_Chr07g0183081 Lupinus albus
Lalb_Chr22g0360681 Lupinus albus
Lj1g0014101 Lotus japonicus
Lj4g0005296 Lotus japonicus
Lsat_1_v5_gn_0_6101 Lactuca sativa
Lsat_1_v5_gn_2_91081 Lactuca sativa
Manes.14G057736 Manihot esculenta
Manes.15G152600 Manihot esculenta
MBI10_g42976_MAGBIO Magnolia biondii
Medtr7g033080 Medicago truncatula
MELO3C021597.2 Cucumis melo
Migut.H00030 Erythranthe guttata
Migut.K01416 Erythranthe guttata
Nn3g16657 Nelumbo nucifera
Nn4g22550 Nelumbo nucifera
PGR142G0831 Punica granatum
PGSC0003DMG400012614 Solanum tuberosum
Phvul.003G206500 Phaseolus vulgaris
Phvul.004G061700 Phaseolus vulgaris
Phvul.008G151600 Phaseolus vulgaris
Potri.001G342100 Populus trichocarpa
Prupe.3G295100 Prunus persica
Prupe.5G162900 Prunus persica
Psat3g172000 Pisum sativum
PSO017G3033 Papaver somniferum
QL02p073829 Quercus lobata
QL10p006090 Quercus lobata
QL10p006100 Quercus lobata
RcHm_v2.0_Chr2g0173451 Rosa chinensis
Rhsim08G0048000 Rhododendron simsii
SalBow1G6940 Salvia bowleyana
SalBow7G1031 Salvia bowleyana
Sc16g0004380 Simmondsia chinensis
Sed0024202 Sechium edule
SGA_v2.0_scaffold135G34923 Striga asiatica
SGA_v2.0_scaffold18G08254 Striga asiatica
Solyc02g093525.1 Solanum lycopersicum
Sopen02g038130 Solanum pennellii
Sp6g29610 Schrenkiella parvula
TAR371G0818 Trochodendron aralioides
TAR374G0807 Trochodendron aralioides
THA.LOC104821171 Tarenaya hassleriana
Thecc.03G117800 Theobroma cacao
Thecc.04G021100 Theobroma cacao
Thhalv10014918m.g Eutrema salsugineum
TPR.G1088 Trifolium pratense
TWI56G0033 Tripterygium wilfordii
VMungo1215G1852 Vigna mungo
VMungo1383G0878 Vigna mungo

User provided reference genes

Program Settings