Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p25730 Brassica napus
A09p37820 Brassica napus
Aa31LG6G10160 Aethionema arabicum
Actinidia07587 Actinidia chinensis
Actinidia26129 Actinidia chinensis
Ah.09g237440 Amaranthus hybridus
AL1G41800 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea
AT1G28250 Arabidopsis thaliana
ATR0763G085 Amborella trichopoda
Atru.chr10.1858 Acer truncatum
AUR62017028 Chenopodium quinoa
BcaB03g12118 Brassica carinata
BcaB07g32433 Brassica carinata
BcaC01g00030 Brassica carinata
BcaC05g26830 Brassica carinata
BolC3t19748H Brassica oleracea
BolC5t31425H Brassica oleracea
BraA08t34523Z Brassica rapa
BraA09t39294Z Brassica rapa
C03p74970 Brassica napus
C05p27060 Brassica napus
CAN.G529.14 Capsicum annuum
CANSAT35G0751 Cannabis sativa
CARHR027740 Cardamine hirsuta
Carub.0001s2669 Capsella rubella
Ca_18554_v3 Cicer arietinum L.
Cc02_g13540 Coffea canephora
CDE01G0551 Ceratophyllum demersum
CDE12G0235 Ceratophyllum demersum
Ciclev10017252m.g Citrus clementina
CiPaw.09G061300 Carya illinoinensis
ClCG03G008150 Citrullus lanatus
COL.COLO4_31450 Corchorus olitorius
CsaV3_1G012400 Cucumis sativus L.
CSS0032734 Camellia sinensis var. sinensis
DCAR_004065 Daucus carota
DCAR_008032 Daucus carota
Dinv17325 Davidia involucrata
Dinv40575 Davidia involucrata
ECA234G4273 Erigeron canadensis
EL10Ac8g20395 Beta vulgaris
Eucgr.E03264 Eucalyptus grandis
FAN16G1611 Fragaria x ananassa
FAN21G1653 Fragaria x ananassa
FAN25G3510 Fragaria x ananassa
FvH4_3g08990 Fragaria vesca
Glyma.07G198400 Glycine max
Glyma.13G178000 Glycine max
Gohir.A06G129300 Gossypium hirsutum
Gohir.D06G133300 Gossypium hirsutum
Gorai.010G155100 Gossypium raimondii
HanXRQChr14g0435131 Helianthus annuus
Haze_06424 Corylus avellana
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla
HPP92_007016 Vanilla planifolia
Hund23773 Selenicereus undatus
Lalb_Chr15g0089751 Lupinus albus
Lj4g0016922 Lotus japonicus
Lsat_1_v5_gn_4_52261 Lactuca sativa
Manes.17G046800 Manihot esculenta
Mapoly0007s0165 Marchantia polymorpha
MD00G1116000 Malus domestica
MD10G1292600 Malus domestica
Medtr4g088680 Medicago truncatula
MELO3C002614.2 Cucumis melo
Migut.M01131 Erythranthe guttata
MSTRG.7339 Avicennia marina
Nitab4.5_0005745g0020 Nicotiana tabacum
Nn1g04136 Nelumbo nucifera
Os07g0299600 Oryza sativa ssp. japonica
Peaxi162Scf00623g00519 Petunia axillaris
PGR042G2867 Punica granatum
PGSC0003DMG401029703 Solanum tuberosum
Phvul.002G229600 Phaseolus vulgaris
Potri.004G045400 Populus trichocarpa
Pp3c8_510 Physcomitrium patens
Prupe.4G049200 Prunus persica
Psat7g114520 Pisum sativum
PSO541G0778 Papaver somniferum
QL05p041285 Quercus lobata
RcHm_v2.0_Chr5g0008721 Rosa chinensis
Rhsim02G0132100 Rhododendron simsii
Sabra04G0028300 Salix brachista
SalBow8G3155 Salvia bowleyana
SalBow8G5072 Salvia bowleyana
Sc05g0007570 Simmondsia chinensis
Sed0001788 Sechium edule
Sed0014393 Sechium edule
SEGI_38595 Sequoiadendron giganteum
SEGI_39568 Sequoiadendron giganteum
SGA_v2.0_scaffold100G29692 Striga asiatica
Solyc02g078010.4 Solanum lycopersicum
Sopen02g022850 Solanum pennellii
TAR626G1757 Trochodendron aralioides
THA.LOC104820545 Tarenaya hassleriana
Thecc.06G185100 Theobroma cacao
Thhalv10009792m.g Eutrema salsugineum
TPR.G16329 Trifolium pratense
TWI38G2229 Tripterygium wilfordii
TWI63G1057 Tripterygium wilfordii
unitig_27.g24965 Utricularia gibba
vmacro15913 Vaccinium macrocarpon
VMungo0251G0987 Vigna mungo
VMungo0647G0543 Vigna mungo
Zm00001eb305570 Zea mays

User provided reference genes

Program Settings