Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p09560 Brassica napus
Aa31LG1G2830 Aethionema arabicum
Actinidia30489 Actinidia chinensis
Ah.12g062420 Amaranthus hybridus
AL1G23070 Arabidopsis lyrata
Aqoxy1G00179 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F4A8JX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JM9TK1 Arachis hypogaea
AT1G11900 Arabidopsis thaliana
ATR1127G094 Amborella trichopoda
Atru.chr6.3074 Acer truncatum
AUR62005438 Chenopodium quinoa
AUR62009636 Chenopodium quinoa
AUR62041771 Chenopodium quinoa
BcaC05g25243 Brassica carinata
BolC5t29876H Brassica oleracea
BraA06t24146Z Brassica rapa
C05p11270 Brassica napus
CAN.G508.23 Capsicum annuum
CANSAT64G1356 Cannabis sativa
CARHR012220 Cardamine hirsuta
Carub.0001s1156 Capsella rubella
Ca_01535_v3 Cicer arietinum L.
Cc05_g06270 Coffea canephora
CDE04G1271 Ceratophyllum demersum
Cfa014545 Carpinus fangiana
Ciclev10016159m.g Citrus clementina
CiPaw.03G169800 Carya illinoinensis
ClCG01G013900 Citrullus lanatus
Cpa.g.sc116.70 Carica papaya
CsaV3_1G014130 Cucumis sativus L.
CSS0001951 Camellia sinensis var. sinensis
CSS0030135 Camellia sinensis var. sinensis
DCAR_012978 Daucus carota
Dinv15494 Davidia involucrata
Duzib052G0115 Durio zibethinus
ECA234G1359 Erigeron canadensis
EL10As1g23104 Beta vulgaris
Eucgr.A01777 Eucalyptus grandis
FAN02G4278 Fragaria x ananassa
FAN14G1737 Fragaria x ananassa
FAN14G4544 Fragaria x ananassa
FvH4_6g24020 Fragaria vesca
FvH4_6g44590 Fragaria vesca
Glyma.12G201200 Glycine max
Glyma.13G301000 Glycine max
Gohir.A04G105900 Gossypium hirsutum
Gohir.D04G145700 Gossypium hirsutum
Gorai.012G131800 Gossypium raimondii
GSVIVG01020865001 Vitis vinifera
HanXRQChr15g0488101 Helianthus annuus
Haze_13088 Corylus avellana
Hma1.2p1_0565F.1_g179540 Hydrangea macrophylla
HPP92_019763 Vanilla planifolia
Hund01235 Selenicereus undatus
Hund01238 Selenicereus undatus
Lalb_Chr14g0366621 Lupinus albus
Lj1P735T42 Lonicera japonica
Lj3g0021775 Lotus japonicus
Lsat_1_v5_gn_4_69540 Lactuca sativa
Manes.01G177300 Manihot esculenta
MBI03_g06061_MAGBIO Magnolia biondii
MD14G1065400 Malus domestica
MD17G1084400 Malus domestica
Medtr2g007050 Medicago truncatula
Medtr2g090030 Medicago truncatula
Migut.M00334 Erythranthe guttata
MSTRG.13304 Avicennia marina
Nitab4.5_0001871g0100 Nicotiana tabacum
Nitab4.5_0002370g0080 Nicotiana tabacum
Nn1g08105 Nelumbo nucifera
Nn2g14540 Nelumbo nucifera
Nn8g41289 Nelumbo nucifera
Os05g0481800 Oryza sativa ssp. japonica
Peaxi162Scf00007g02726 Petunia axillaris
PGR042G3246 Punica granatum
PGSC0003DMG400018370 Solanum tuberosum
Phvul.005G107600 Phaseolus vulgaris
Potri.001G273100 Populus trichocarpa
Potri.009G067400 Populus trichocarpa
Prupe.3G231200 Prunus persica
Psat5g268080 Pisum sativum
PSO339G5345 Papaver somniferum
PSO384G2432 Papaver somniferum
QL03p011182 Quercus lobata
RcHm_v2.0_Chr1g0342741 Rosa chinensis
RcHm_v2.0_Chr2g0161831 Rosa chinensis
Rhsim04G0063100 Rhododendron simsii
Sabra09G0050300 Salix brachista
Sabra16G0168300 Salix brachista
SalBow7G4701 Salvia bowleyana
Sc06g0009160 Simmondsia chinensis
Sed0007470 Sechium edule
SGA_v2.0_scaffold70G23463 Striga asiatica
Solyc07g054680.3 Solanum lycopersicum
Sopen07g028580 Solanum pennellii
Sp1g10520 Schrenkiella parvula
TAR633G2446 Trochodendron aralioides
TAR636G0075 Trochodendron aralioides
THA.LOC104809493 Tarenaya hassleriana
Thecc.02G171700 Theobroma cacao
Thhalv10007999m.g Eutrema salsugineum
TPR.G27076 Trifolium pratense
TWI36G0005 Tripterygium wilfordii
vmacro09292 Vaccinium macrocarpon
VMungo1080G1478 Vigna mungo
Zm00001eb290940 Zea mays

User provided reference genes

Program Settings