Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p43580 Brassica napus
Aa31LG5G7130 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1358 Anthoceros agrestis
Actinidia33776 Actinidia chinensis
Ah.15g098550 Amaranthus hybridus
AL41U10070 Arabidopsis lyrata
AL4G23740 Arabidopsis lyrata
Aqoxy1G00887 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea
AT2G29180 Arabidopsis thaliana
ATR0559G356 Amborella trichopoda
Atru.chr3.3962 Acer truncatum
AUR62001749 Chenopodium quinoa
AUR62020022 Chenopodium quinoa
BcaB01g03133 Brassica carinata
BcaB01g03134 Brassica carinata
BcaC03g18293 Brassica carinata
BolC2t12437H Brassica oleracea
BraA02t09285Z Brassica rapa
C02p63690 Brassica napus
CANSAT54G1805 Cannabis sativa
CARHR122460 Cardamine hirsuta
Carub.0004s1020 Capsella rubella
Ca_01307_v3 Cicer arietinum L.
Cc01_g13240 Coffea canephora
CDE04G3075 Ceratophyllum demersum
Cfa011538 Carpinus fangiana
Ciclev10029397m.g Citrus clementina
CiPaw.14G066400 Carya illinoinensis
ClCG02G019960 Citrullus lanatus
COL.COLO4_18565 Corchorus olitorius
Cpa.g.sc81.107 Carica papaya
CsaV3_6G016660 Cucumis sativus L.
CSS0034107 Camellia sinensis var. sinensis
DCAR_005951 Daucus carota
Dinv17036 Davidia involucrata
Dinv42982 Davidia involucrata
Dinv43117 Davidia involucrata
Duzib168G0085 Durio zibethinus
ECA248G2900 Erigeron canadensis
EL10Ac7g16055 Beta vulgaris
Eucgr.J02035 Eucalyptus grandis
FAN11G3606 Fragaria x ananassa
FAN21G2492 Fragaria x ananassa
FAN25G3374 Fragaria x ananassa
FvH4_3g36880 Fragaria vesca
Glyma.13G338500 Glycine max
Glyma.15G035800 Glycine max
Gohir.A07G099900 Gossypium hirsutum
Gohir.D07G104200 Gossypium hirsutum
Gorai.001G112100 Gossypium raimondii
GSVIVG01024917001 Vitis vinifera
HanXRQChr01g0010441 Helianthus annuus
Haze_24148 Corylus avellana
Hund18892 Selenicereus undatus
Lalb_Chr24g0394031 Lupinus albus
Lj3g0004900 Lotus japonicus
Lsat_1_v5_gn_5_169441 Lactuca sativa
Manes.01G170100 Manihot esculenta
Mapoly0102s0035 Marchantia polymorpha
MBI14_g08028_MAGBIO Magnolia biondii
MD03G1086900 Malus domestica
MD11G1096000 Malus domestica
Medtr1g071380 Medicago truncatula
Medtr2g097680 Medicago truncatula
MELO3C025896.2 Cucumis melo
Migut.D00885 Erythranthe guttata
MSTRG.11098 Avicennia marina
Nitab4.5_0006942g0010 Nicotiana tabacum
Nitab4.5_0014843g0020 Nicotiana tabacum
Nn2g13417 Nelumbo nucifera
Nn8g40679 Nelumbo nucifera
Oeu002436.1 Olea europaea
Oeu002437.1 Olea europaea
Peaxi162Scf00038g02028 Petunia axillaris
PGR119G0519 Punica granatum
PGSC0003DMG400014567 Solanum tuberosum
Phvul.L007743 Phaseolus vulgaris
Potri.001G243500 Populus trichocarpa
Potri.009G034951 Populus trichocarpa
Pp3c15_10400 Physcomitrium patens
Prupe.6G071500 Prunus persica
Psat5g287960 Pisum sativum
PSO339G5862 Papaver somniferum
PSO513G0105 Papaver somniferum
QL01p030632 Quercus lobata
RcHm_v2.0_Chr5g0066101 Rosa chinensis
Rhsim13G0078000 Rhododendron simsii
Sabra16G0147800 Salix brachista
Sc25g0001650 Simmondsia chinensis
Sed0006840 Sechium edule
SGA_v2.0_scaffold111G31536 Striga asiatica
Solyc05g009300.1 Solanum lycopersicum
Sopen05g005050 Solanum pennellii
Sp4g11990 Schrenkiella parvula
TAR369G0859 Trochodendron aralioides
TAR560G0010 Trochodendron aralioides
TAR623G1366 Trochodendron aralioides
THA.LOC104800684 Tarenaya hassleriana
Thecc.09G317100 Theobroma cacao
Thhalv10017315m.g Eutrema salsugineum
TPR.G6833 Trifolium pratense
TWI31G0635 Tripterygium wilfordii
TWI79G0692 Tripterygium wilfordii
unitig_899.g15261 Utricularia gibba
vmacro03038 Vaccinium macrocarpon
VMungo1080G0594 Vigna mungo

User provided reference genes

Program Settings