Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p58160 Brassica napus
Aa31LG7G14990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.94 Anthoceros agrestis
Actinidia06355 Actinidia chinensis
AL4G10720 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.S2FUN4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TU72Q6 Arachis hypogaea
AT2G21530 Arabidopsis thaliana
ATR0068G111 Amborella trichopoda
Atru.chr3.2913 Acer truncatum
AUR62001600 Chenopodium quinoa
AUR62020179 Chenopodium quinoa
BcaC07g41154 Brassica carinata
BolC8t51703H Brassica oleracea
BraA09t41205Z Brassica rapa
CAN.G651.2 Capsicum annuum
CANSAT54G3001 Cannabis sativa
CARHR112460 Cardamine hirsuta
Carub.0004s0057 Capsella rubella
Ca_16255_v3 Cicer arietinum L.
Cc01_g07450 Coffea canephora
CDE07G0519 Ceratophyllum demersum
Cfa010246 Carpinus fangiana
Ciclev10016536m.g Citrus clementina
CiPaw.13G127300 Carya illinoinensis
ClCG02G024290 Citrullus lanatus
COL.COLO4_25292 Corchorus olitorius
Cpa.g.c47634 Carica papaya
Cpa.g.sc103.87 Carica papaya
Cre12.g534450 Chlamydomonas reinhardtii
CsaV3_4G017420 Cucumis sativus L.
CSS0014161 Camellia sinensis var. sinensis
CSS0024406 Camellia sinensis var. sinensis
DCAR_028386 Daucus carota
Dinv32124 Davidia involucrata
Duzib168G0238 Durio zibethinus
EL10Ac7g16235 Beta vulgaris
Eucgr.J00617 Eucalyptus grandis
FAN11G0122 Fragaria x ananassa
FAN16G1710 Fragaria x ananassa
FAN25G1860 Fragaria x ananassa
FvH4_3g27180 Fragaria vesca
Glyma.20G058100 Glycine max
Gohir.A05G075400 Gossypium hirsutum
Gohir.D05G078200 Gossypium hirsutum
Gorai.009G079700 Gossypium raimondii
HanXRQChr03g0085111 Helianthus annuus
Haze_23636 Corylus avellana
Hma1.2p1_0994F.1_g245580 Hydrangea macrophylla
Hund18825 Selenicereus undatus
Lalb_Chr14g0363361 Lupinus albus
Lj6g0015831 Lotus japonicus
Lsat_1_v5_gn_6_85860 Lactuca sativa
Manes.09G111800 Manihot esculenta
Mapoly0061s0077 Marchantia polymorpha
MBI19_g09308_MAGBIO Magnolia biondii
MCO05G554 Micromonas commoda
MCO16G316 Micromonas commoda
MD11G1181300 Malus domestica
Medtr3g079520 Medicago truncatula
Medtr3g479600 Medicago truncatula
MELO3C014714.2 Cucumis melo
Migut.N02412 Erythranthe guttata
MSTRG.17655 Avicennia marina
Nitab4.5_0000428g0130 Nicotiana tabacum
Nitab4.5_0002300g0100 Nicotiana tabacum
Nn6g32384 Nelumbo nucifera
Oeu032066.1 Olea europaea
Os11g0127800 Oryza sativa ssp. japonica
Os12g0124000 Oryza sativa ssp. japonica
Peaxi162Scf00342g00119 Petunia axillaris
PGR119G0910 Punica granatum
PGSC0003DMG400022700 Solanum tuberosum
Phvul.L004437 Phaseolus vulgaris
Potri.009G156700 Populus trichocarpa
Potri.009G156900 Populus trichocarpa
Pp3c1_27160 Physcomitrium patens
Pp3c2_15500 Physcomitrium patens
PRCOL_00003243 Prasinoderma coloniale
Prupe.6G154100 Prunus persica
Psat5g112360 Pisum sativum
PSO339G3146 Papaver somniferum
PSO384G0367 Papaver somniferum
QL01p020523 Quercus lobata
RcHm_v2.0_Chr5g0049851 Rosa chinensis
Rhsim01G0197200 Rhododendron simsii
Sabra09G0122700 Salix brachista
SalBow3G2238 Salvia bowleyana
Sc06g0006180 Simmondsia chinensis
Sed0004996 Sechium edule
SEGI_12571 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07576 Striga asiatica
SGA_v2.0_scaffold3G01630 Striga asiatica
SMO271G0152 Selaginella moellendorffii
Solyc01g009080.4 Solanum lycopersicum
Sopen01g004570 Solanum pennellii
Sp4g00690 Schrenkiella parvula
TAR623G1137 Trochodendron aralioides
THA.LOC104816966 Tarenaya hassleriana
Thecc.09G263800 Theobroma cacao
Thhalv10000320m.g Eutrema salsugineum
TPR.G9589 Trifolium pratense
TWI79G1263 Tripterygium wilfordii
unitig_8.g2984 Utricularia gibba
vmacro23061 Vaccinium macrocarpon
VMungo0540G0573 Vigna mungo
VMungo0540G1942 Vigna mungo
Zm00001eb163720 Zea mays

User provided reference genes

Program Settings