Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p04160 Brassica napus
A09p52160 Brassica napus
Aa31LG10G14120 Aethionema arabicum
Aa31LG1G25680 Aethionema arabicum
Ah.07g203290 Amaranthus hybridus
AL4G42890 Arabidopsis lyrata
AL5G42000 Arabidopsis lyrata
AT2G44010 Arabidopsis thaliana
AT3G59880 Arabidopsis thaliana
ATR0743G073 Amborella trichopoda
Atru.chr3.1975 Acer truncatum
AUR62002488 Chenopodium quinoa
BcaB01g03336 Brassica carinata
BcaB01g03345 Brassica carinata
BcaB02g08925 Brassica carinata
BcaC01g05191 Brassica carinata
BcaC01g05192 Brassica carinata
BcaC02g12345 Brassica carinata
BcaC07g40438 Brassica carinata
BcaC07g40552 Brassica carinata
BolC3t15284H Brassica oleracea
BolC4t22123H Brassica oleracea
BolC8t51085H Brassica oleracea
BraA03t11669Z Brassica rapa
BraA05t19402Z Brassica rapa
BraA09t40647Z Brassica rapa
C03p29370 Brassica napus
C04p04930 Brassica napus
C08p34830 Brassica napus
CANSAT01G1842 Cannabis sativa
CARHR139190 Cardamine hirsuta
CARHR170210 Cardamine hirsuta
Carub.0004s2657 Capsella rubella
Carub.0005s2662 Capsella rubella
CDE09G0875 Ceratophyllum demersum
Cfa008520 Carpinus fangiana
Ciclev10022922m.g Citrus clementina
CiPaw.01G202100 Carya illinoinensis
CiPaw.02G125200 Carya illinoinensis
ClCG06G009780 Citrullus lanatus
COL.COLO4_14410 Corchorus olitorius
CsaV3_2G011240 Cucumis sativus L.
DCAR_023792 Daucus carota
DCAR_027493 Daucus carota
Dinv24749 Davidia involucrata
ECA233G4211 Erigeron canadensis
EL10Ac3g06173 Beta vulgaris
Eucgr.A00421 Eucalyptus grandis
Glyma.04G203100 Glycine max
Glyma.05G198900 Glycine max
Glyma.06G162400 Glycine max
Glyma.08G006200 Glycine max
Gohir.A09G196300 Gossypium hirsutum
Gohir.D09G190900 Gossypium hirsutum
Gorai.006G213700 Gossypium raimondii
Haze_11125 Corylus avellana
Hma1.2p1_1782F.1_g302120 Hydrangea macrophylla
Lalb_Chr11g0068971 Lupinus albus
Lalb_Chr12g0202631 Lupinus albus
Lj1g0006483 Lotus japonicus
Manes.01G009800 Manihot esculenta
Manes.05G207200 Manihot esculenta
Medtr3g098390 Medicago truncatula
MELO3C008506.2 Cucumis melo
Migut.G00917 Erythranthe guttata
Migut.N03023 Erythranthe guttata
Nitab4.5_0000160g0050 Nicotiana tabacum
Nitab4.5_0001110g0010 Nicotiana tabacum
Nn1g09433 Nelumbo nucifera
Nn1g09434 Nelumbo nucifera
Nn7g37449 Nelumbo nucifera
Oeu018062.1 Olea europaea
Oeu039258.1 Olea europaea
Peaxi162Scf00057g00224 Petunia axillaris
Peaxi162Scf00169g00094 Petunia axillaris
PGR042G0806 Punica granatum
PGSC0003DMG400020384 Solanum tuberosum
PGSC0003DMG400029271 Solanum tuberosum
Phvul.002G279900 Phaseolus vulgaris
Phvul.009G159100 Phaseolus vulgaris
Potri.007G145500 Populus trichocarpa
Potri.017G002100 Populus trichocarpa
Prupe.7G270300 Prunus persica
Psat5g055880 Pisum sativum
QL10p064610 Quercus lobata
QL10p065732 Quercus lobata
Rhsim09G0003000 Rhododendron simsii
Rhsim09G0003300 Rhododendron simsii
Sabra07G0115500 Salix brachista
Sabra17G0006100 Salix brachista
SalBow3G3102 Salvia bowleyana
Sc13g0007600 Simmondsia chinensis
Sed0023616 Sechium edule
SGA_v2.0_scaffold12G06221 Striga asiatica
SGA_v2.0_scaffold25G11017 Striga asiatica
Solyc12g017960.1 Solanum lycopersicum
Sopen12g009180 Solanum pennellii
Sopen12g032450 Solanum pennellii
Sp4g26100 Schrenkiella parvula
Sp5g03270 Schrenkiella parvula
TAR365G0873 Trochodendron aralioides
THA.LOC104827561 Tarenaya hassleriana
Thecc.05G001300 Theobroma cacao
Thhalv10001750m.g Eutrema salsugineum
Thhalv10006503m.g Eutrema salsugineum
TPR.G7792 Trifolium pratense
TWI15G0669 Tripterygium wilfordii
vmacro00725 Vaccinium macrocarpon

User provided reference genes

Program Settings