Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p04630 Brassica napus
A06p47840 Brassica napus
Aa31LG10G5550 Aethionema arabicum
Actinidia02617 Actinidia chinensis
Ah.05g171160 Amaranthus hybridus
AL1G54790 Arabidopsis lyrata
Aqoxy6G00205 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.65RZ9M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B2XLC5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HQB0BQ Arachis hypogaea
AT1G48200 Arabidopsis thaliana
ATR0716G022 Amborella trichopoda
Atru.chr10.1388 Acer truncatum
BcaB07g33731 Brassica carinata
BcaB07g33733 Brassica carinata
BcaB07g33783 Brassica carinata
BcaC06g31695 Brassica carinata
BcaC06g34651 Brassica carinata
BcaC08g43014 Brassica carinata
BolC6t35395H Brassica oleracea
BolC7t43138H Brassica oleracea
BraA06t23667Z Brassica rapa
BraA06t27654Z Brassica rapa
C06p02690 Brassica napus
C07p26120 Brassica napus
CANSAT25G3837 Cannabis sativa
CARHR037830 Cardamine hirsuta
Carub.0001s3729 Capsella rubella
Carub.0007s3396 Capsella rubella
Ca_09797_v3 Cicer arietinum L.
CDE06G1719 Ceratophyllum demersum
Cfa016011 Carpinus fangiana
Ciclev10002868m.g Citrus clementina
CiPaw.05G222500 Carya illinoinensis
ClCG11G015710 Citrullus lanatus
COL.COLO4_35932 Corchorus olitorius
Cpa.g.sc36.60 Carica papaya
CsaV3_4G028300 Cucumis sativus L.
CSS0048322 Camellia sinensis var. sinensis
DCAR_003548 Daucus carota
Duzib093G0837 Durio zibethinus
ECA248G1302 Erigeron canadensis
EL10Ac1g01002 Beta vulgaris
Eucgr.F03786 Eucalyptus grandis
FAN15G0425 Fragaria x ananassa
FAN20G0163 Fragaria x ananassa
FAN27G1944 Fragaria x ananassa
FvH4_2g26810 Fragaria vesca
Glyma.20G199500 Glycine max
Gohir.A06G044000 Gossypium hirsutum
Gohir.D06G044900 Gossypium hirsutum
Gorai.010G050000 Gossypium raimondii
GSVIVG01008877001 Vitis vinifera
HanXRQChr13g0407621 Helianthus annuus
Haze_00452 Corylus avellana
Hma1.2p1_0186F.1_g081760 Hydrangea macrophylla
HPP92_002815 Vanilla planifolia
Hund17288 Selenicereus undatus
Lalb_Chr06g0169561 Lupinus albus
Lj5g0017876 Lotus japonicus
Lsat_1_v5_gn_4_16480 Lactuca sativa
Lsat_1_v5_gn_5_179321 Lactuca sativa
Manes.18G076600 Manihot esculenta
MBI01_g01252_MAGBIO Magnolia biondii
MBI01_g01253_MAGBIO Magnolia biondii
MBI01_g01254_MAGBIO Magnolia biondii
MBI01_g01255_MAGBIO Magnolia biondii
MD08G1164500 Malus domestica
Medtr1g073190 Medicago truncatula
MELO3C010475.2 Cucumis melo
Migut.C01135 Erythranthe guttata
MSTRG.1448 Avicennia marina
Nitab4.5_0001273g0060 Nicotiana tabacum
Nitab4.5_0001803g0080 Nicotiana tabacum
Nn5g28257 Nelumbo nucifera
Oeu040422.1 Olea europaea
Os06g0149500 Oryza sativa ssp. japonica
Peaxi162Scf00537g00034 Petunia axillaris
Peaxi162Scf17552g00001 Petunia axillaris
PGR142G2996 Punica granatum
PGSC0003DMG400000898 Solanum tuberosum
Phvul.L001676 Phaseolus vulgaris
Potri.002G084400 Populus trichocarpa
Prupe.1G499600 Prunus persica
Psat6g131200 Pisum sativum
PSO170G1503 Papaver somniferum
PSO528G0221 Papaver somniferum
QL09p034990 Quercus lobata
RcHm_v2.0_Chr6g0295671 Rosa chinensis
Rhsim03G0059000 Rhododendron simsii
SalBow7G0738 Salvia bowleyana
Sc25g0000500 Simmondsia chinensis
Sed0023701 Sechium edule
SEGI_11751 Sequoiadendron giganteum
SGA_v2.0_scaffold24G10465 Striga asiatica
SGA_v2.0_scaffold52G18969 Striga asiatica
SGA_v2.0_scaffold52G18970 Striga asiatica
Solyc11g012890.2 Solanum lycopersicum
Sopen11g007630 Solanum pennellii
Sp1g35150 Schrenkiella parvula
Sp1g35170 Schrenkiella parvula
TAR381G0547 Trochodendron aralioides
THA.LOC104821809 Tarenaya hassleriana
Thecc.08G124300 Theobroma cacao
Thhalv10011824m.g Eutrema salsugineum
TPR.G18552 Trifolium pratense
TWI36G0927 Tripterygium wilfordii
unitig_37.g12972 Utricularia gibba

User provided reference genes

Program Settings