Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p16690 Brassica napus
A09p57710 Brassica napus
Aa31LG7G14550 Aethionema arabicum
Actinidia36596 Actinidia chinensis
Ah.06g193060 Amaranthus hybridus
AL4G11660 Arabidopsis lyrata
AT1G11608 Arabidopsis thaliana
AT2G22180 Arabidopsis thaliana
AT4G39745 Arabidopsis thaliana
Atru.chr4.115 Acer truncatum
AUR62000030 Chenopodium quinoa
AUR62019200 Chenopodium quinoa
BcaB08g35048 Brassica carinata
BcaC02g08684 Brassica carinata
BcaC02g08732 Brassica carinata
BcaC07g41089 Brassica carinata
BcaC07g41090 Brassica carinata
BolC4t26712H Brassica oleracea
BolC8t51657H Brassica oleracea
BraA04t17302Z Brassica rapa
BraA09t41164Z Brassica rapa
C04p51230 Brassica napus
C08p40920 Brassica napus
CAN.G383.12 Capsicum annuum
CAN.G725.2 Capsicum annuum
CANSAT01G0360 Cannabis sativa
CARHR113340 Cardamine hirsuta
CARHR246970 Cardamine hirsuta
Carub.0004s0134 Capsella rubella
Carub.0007s0163 Capsella rubella
Ciclev10027435m.g Citrus clementina
ClCG08G011020 Citrullus lanatus
COL.COLO4_09942 Corchorus olitorius
COL.COLO4_16431 Corchorus olitorius
Cpa.g.c29749 Carica papaya
CsaV3_1G022890 Cucumis sativus L.
CSS0050475 Camellia sinensis var. sinensis
Dinv16299 Davidia involucrata
Duzib147G1351 Durio zibethinus
Duzib264G0914 Durio zibethinus
EL10Ac4g10347 Beta vulgaris
FAN19G3039 Fragaria x ananassa
FAN23G0488 Fragaria x ananassa
FAN26G2605 Fragaria x ananassa
FAN28G0479 Fragaria x ananassa
FvH4_1g21180 Fragaria vesca
Gohir.A02G144000 Gossypium hirsutum
Gohir.A12G090900 Gossypium hirsutum
Gohir.D03G036600 Gossypium hirsutum
Gohir.D12G096300 Gossypium hirsutum
Gorai.003G038400 Gossypium raimondii
Gorai.008G104500 Gossypium raimondii
Hma1.2p1_0308F.1_g120090 Hydrangea macrophylla
HPP92_016345 Vanilla planifolia
Lalb_Chr11g0075311 Lupinus albus
Lalb_Chr12g0203771 Lupinus albus
Lalb_Chr13g0296021 Lupinus albus
Lj4g0021275 Lotus japonicus
Lsat_1_v5_gn_9_43820 Lactuca sativa
Manes.12G136600 Manihot esculenta
MD01G1027300 Malus domestica
MD08G1180500 Malus domestica
MD15G1326600 Malus domestica
MD15G1366200 Malus domestica
Medtr8g090320 Medicago truncatula
MELO3C011361.2 Cucumis melo
Migut.H02369 Erythranthe guttata
MSTRG.23335 Avicennia marina
Nitab4.5_0000104g0220 Nicotiana tabacum
Nitab4.5_0000715g0080 Nicotiana tabacum
Nitab4.5_0002378g0010 Nicotiana tabacum
Nitab4.5_0004910g0030 Nicotiana tabacum
Oeu039751.1 Olea europaea
Oeu056593.1 Olea europaea
Os03g0191800 Oryza sativa ssp. japonica
Peaxi162Scf00295g00092 Petunia axillaris
Peaxi162Scf01263g00012 Petunia axillaris
PGR044G0913 Punica granatum
PGSC0003DMG400008558 Solanum tuberosum
PGSC0003DMG400020617 Solanum tuberosum
PGSC0003DMG400021819 Solanum tuberosum
Potri.005G077100 Populus trichocarpa
Prupe.6G182500 Prunus persica
Psat7g055040 Pisum sativum
QL12p036377 Quercus lobata
Rhsim10G0159300 Rhododendron simsii
Sabra05G0063500 Salix brachista
Sabra07G0074600 Salix brachista
Sc03g0002150 Simmondsia chinensis
Sed0015627 Sechium edule
Sed0016694 Sechium edule
SGA_v2.0_scaffold111G31525 Striga asiatica
Solyc04g054960.1 Solanum lycopersicum
Solyc05g051890.1 Solanum lycopersicum
Sopen04g024800 Solanum pennellii
Sopen05g030420 Solanum pennellii
Sp4g01240 Schrenkiella parvula
Sp7g36140 Schrenkiella parvula
THA.LOC104804156 Tarenaya hassleriana
THA.LOC104807704 Tarenaya hassleriana
Thecc.01G104000 Theobroma cacao
Thhalv10000276m.g Eutrema salsugineum
Thhalv10027061m.g Eutrema salsugineum
TPR.G2188 Trifolium pratense
TWI74G0906 Tripterygium wilfordii
unitig_899.g15008 Utricularia gibba
VMungo0251G1798 Vigna mungo
Zm00001eb006970 Zea mays
Zm00001eb401300 Zea mays

User provided reference genes

Program Settings