Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia38172 Actinidia chinensis
AL2G41250 Arabidopsis lyrata
AL7G47090 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.3NP1QY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TIKV1F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z0SJI2 Arachis hypogaea
AT1G80245 Arabidopsis thaliana
AT4G00695 Arabidopsis thaliana
ATR0763G267 Amborella trichopoda
Atru.chr10.619 Acer truncatum
AUR62017567 Chenopodium quinoa
BcaC03g15989 Brassica carinata
BolC2t07567H Brassica oleracea
C02p14430 Brassica napus
CARHR074240 Cardamine hirsuta
Carub.0007s3329 Capsella rubella
Ca_31281_v3 Cicer arietinum L.
Cc01_g06080 Coffea canephora
CDE03G0339 Ceratophyllum demersum
CDE03G0351 Ceratophyllum demersum
Ciclev10018165m.g Citrus clementina
Ciclev10029535m.g Citrus clementina
CiPaw.10G112300 Carya illinoinensis
ClCG07G002120 Citrullus lanatus
COL.COLO4_30930 Corchorus olitorius
Cpa.g.sc64.50 Carica papaya
CsaV3_3G030060 Cucumis sativus L.
CsaV3_4G011770 Cucumis sativus L.
DCAR_001337 Daucus carota
DCAR_031675 Daucus carota
Dinv01436 Davidia involucrata
Dinv20263 Davidia involucrata
Duzib235G1460 Durio zibethinus
EL10Ac9g22805 Beta vulgaris
Eucgr.E02022 Eucalyptus grandis
Eucgr.E04359 Eucalyptus grandis
FAN16G2896 Fragaria x ananassa
FAN21G1503 Fragaria x ananassa
FvH4_3g11820 Fragaria vesca
Glyma.08G176100 Glycine max
Glyma.15G250400 Glycine max
Gohir.A06G140100 Gossypium hirsutum
Gohir.A10G046700 Gossypium hirsutum
Gohir.D06G146500 Gossypium hirsutum
Gohir.D10G048000 Gossypium hirsutum
Gorai.010G170900 Gossypium raimondii
Gorai.011G051100 Gossypium raimondii
GSVIVG01013634001 Vitis vinifera
GSVIVG01019606001 Vitis vinifera
HanXRQChr04g0107331 Helianthus annuus
Hma1.2p1_0074F.1_g039010 Hydrangea macrophylla
HPP92_002517 Vanilla planifolia
HPP92_002534 Vanilla planifolia
Hund24191 Selenicereus undatus
Lalb_Chr16g0392431 Lupinus albus
Lj5g0013157 Lotus japonicus
Lj6g0006317 Lotus japonicus
Lsat_1_v5_gn_4_36120 Lactuca sativa
Lsat_1_v5_gn_7_8820 Lactuca sativa
Manes.02G204000 Manihot esculenta
MBI18_g37406_MAGBIO Magnolia biondii
MD05G1258900 Malus domestica
MD10G1238500 Malus domestica
Medtr8g011490 Medicago truncatula
MELO3C015565.2 Cucumis melo
MELO3C022720.2 Cucumis melo
Migut.N02356 Erythranthe guttata
MSTRG.12451 Avicennia marina
Nitab4.5_0000978g0250 Nicotiana tabacum
Nitab4.5_0002858g0010 Nicotiana tabacum
Nitab4.5_0004758g0070 Nicotiana tabacum
Nn7g37971 Nelumbo nucifera
Oeu043290.1 Olea europaea
Os06g0730500 Oryza sativa ssp. japonica
Peaxi162Scf00378g00634 Petunia axillaris
Peaxi162Scf00586g00008 Petunia axillaris
PGSC0003DMG400021318 Solanum tuberosum
Phvul.008G108200 Phaseolus vulgaris
Potri.001G081300 Populus trichocarpa
Potri.003G149100 Populus trichocarpa
Prupe.4G105800 Prunus persica
Psat0s5329g0080 Pisum sativum
Psat4g125640 Pisum sativum
QL05p062902 Quercus lobata
RcHm_v2.0_Chr5g0019241 Rosa chinensis
Rhsim02G0191400 Rhododendron simsii
Rhsim04G0112200 Rhododendron simsii
Rhsim05G0134700 Rhododendron simsii
Rhsim09G0182200 Rhododendron simsii
Sabra01G0058500 Salix brachista
Sabra03G0108500 Salix brachista
SalBow8G5173 Salvia bowleyana
Sc06g0009730 Simmondsia chinensis
Sed0002565 Sechium edule
SGA_v2.0_scaffold3G01474 Striga asiatica
Solyc01g007180.3 Solanum lycopersicum
Sopen01g003160 Solanum pennellii
Sp1g21760 Schrenkiella parvula
Sp5g35560 Schrenkiella parvula
TAR722G0002 Trochodendron aralioides
THA.LOC104808222 Tarenaya hassleriana
Thecc.06G135800 Theobroma cacao
Thhalv10019705m.g Eutrema salsugineum
TPR.G36295 Trifolium pratense
TWI09G0397 Tripterygium wilfordii
TWI09G0788 Tripterygium wilfordii
unitig_749.g13716 Utricularia gibba
VMungo1383G0797 Vigna mungo
Zm00001eb228930 Zea mays

User provided reference genes

Program Settings