Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p52000 Brassica napus
Aa31LG10G13970 Aethionema arabicum
Ah.07g202820 Amaranthus hybridus
AL5G41750 Arabidopsis lyrata
Aqoxy2G03930 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9WZ3F5 Arachis hypogaea
AT3G59680 Arabidopsis thaliana
ATR0743G235 Amborella trichopoda
Atru.chr4.1429 Acer truncatum
AUR62002398 Chenopodium quinoa
AUR62023787 Chenopodium quinoa
BcaC07g40499 Brassica carinata
BolC8t51070H Brassica oleracea
BraA09t40633Z Brassica rapa
C08p34680 Brassica napus
CAN.G136.10 Capsicum annuum
CANSAT56G1068 Cannabis sativa
CARHR170050 Cardamine hirsuta
Carub.0005s2640 Capsella rubella
Cc03_g14170 Coffea canephora
CDE02G0746 Ceratophyllum demersum
CDE09G0824 Ceratophyllum demersum
Cfa015271 Carpinus fangiana
Ciclev10022275m.g Citrus clementina
CiPaw.01G170200 Carya illinoinensis
CiPaw.02G100200 Carya illinoinensis
ClCG06G001110 Citrullus lanatus
COL.COLO4_00135 Corchorus olitorius
Cpa.g.sc9.370 Carica papaya
CsaV3_6G007050 Cucumis sativus L.
CSS0011584 Camellia sinensis var. sinensis
DCAR_027521 Daucus carota
Dinv33208 Davidia involucrata
Duzib151G0080 Durio zibethinus
Duzib268G1282 Durio zibethinus
ECA238G1604 Erigeron canadensis
EL10Ac3g06096 Beta vulgaris
Eucgr.L00006 Eucalyptus grandis
FAN17G2642 Fragaria x ananassa
FAN22G1962 Fragaria x ananassa
FvH4_4g10370 Fragaria vesca
Glyma.02G137900 Glycine max
Glyma.07G207400 Glycine max
Gohir.A10G144100 Gossypium hirsutum
Gohir.D10G122900 Gossypium hirsutum
Gorai.011G135400 Gossypium raimondii
GSVIVG01038146001 Vitis vinifera
HanXRQChr04g0110541 Helianthus annuus
HanXRQChr10g0285991 Helianthus annuus
Haze_01356 Corylus avellana
Hma1.2p1_0150F.1_g066880 Hydrangea macrophylla
HPP92_007596 Vanilla planifolia
HPP92_023723 Vanilla planifolia
Lalb_Chr05g0218881 Lupinus albus
Lalb_Chr09g0328091 Lupinus albus
Lj4g0027849 Lotus japonicus
Lj6P211T14 Lonicera japonica
Lj6P222T10 Lonicera japonica
Lju470C16T0 Lonicera japonica
Lsat_1_v5_gn_5_190641 Lactuca sativa
Manes.11G128800 Manihot esculenta
MBI11_g16037_MAGBIO Magnolia biondii
MD04G1049300 Malus domestica
MD17G1178000 Malus domestica
Medtr4g087380 Medicago truncatula
MELO3C022424.2 Cucumis melo
Migut.G01175 Erythranthe guttata
Migut.I00402 Erythranthe guttata
MSTRG.4303 Avicennia marina
MSTRG.9732 Avicennia marina
Nn1g09545 Nelumbo nucifera
Nn7g37543 Nelumbo nucifera
Oeu015716.1 Olea europaea
Oeu016616.1 Olea europaea
Oeu016617.1 Olea europaea
Oeu021574.1 Olea europaea
Os01g0393300 Oryza sativa ssp. japonica
Os04g0495900 Oryza sativa ssp. japonica
Peaxi162Scf00180g00003 Petunia axillaris
Peaxi162Scf00483g00061 Petunia axillaris
PGR042G0468 Punica granatum
PGSC0003DMG402016333 Solanum tuberosum
Phvul.003G297000 Phaseolus vulgaris
Potri.019G112300 Populus trichocarpa
Prupe.1G207500 Prunus persica
Psat7g121080 Pisum sativum
PSO017G6467 Papaver somniferum
PSO837G0056 Papaver somniferum
QL10p055936 Quercus lobata
RcHm_v2.0_Chr4g0405921 Rosa chinensis
Rhsim09G0009600 Rhododendron simsii
Sabra19G0108300 Salix brachista
SalBow6G6024 Salvia bowleyana
Sc25g0002820 Simmondsia chinensis
Sed0003072 Sechium edule
SGA_v2.0_scaffold12G06193 Striga asiatica
Solyc06g053440.3 Solanum lycopersicum
Sopen06g018520 Solanum pennellii
Sp5g03500 Schrenkiella parvula
TAR362G0943 Trochodendron aralioides
TAR633G0862 Trochodendron aralioides
TAR633G2258 Trochodendron aralioides
THA.LOC104804037 Tarenaya hassleriana
THA.LOC104816280 Tarenaya hassleriana
Thecc.04G165300 Theobroma cacao
Thhalv10006255m.g Eutrema salsugineum
TWI38G1882 Tripterygium wilfordii
VMungo0251G1340 Vigna mungo
Zm00001eb078580 Zea mays

User provided reference genes

Program Settings