Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p40570 Brassica napus
A06p40600 Brassica napus
Aa31LG2G4670 Aethionema arabicum
Ah.12g065280 Amaranthus hybridus
AL5G17980 Arabidopsis lyrata
Aqoxy3G00863 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.QRE12D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X6PLX1 Arachis hypogaea
AT1G51430 Arabidopsis thaliana
AT3G28370 Arabidopsis thaliana
Atru.chr8.2432 Acer truncatum
AUR62018331 Chenopodium quinoa
AUR62030556 Chenopodium quinoa
BcaC06g30923 Brassica carinata
BcaC06g33744 Brassica carinata
BolC7t44250H Brassica oleracea
BolC7t44254H Brassica oleracea
BraA06t26977Z Brassica rapa
BraA06t26979Z Brassica rapa
C07p37400 Brassica napus
CAN.G206.82 Capsicum annuum
CANSAT64G0721 Cannabis sativa
CARHR292610 Cardamine hirsuta
Carub.0005s0686 Capsella rubella
Ca_08472_v3 Cicer arietinum L.
Cc07_g02800 Coffea canephora
CDE02G1584 Ceratophyllum demersum
Ciclev10012639m.g Citrus clementina
CiPaw.04G066400 Carya illinoinensis
COL.COLO4_36999 Corchorus olitorius
Cpa.g.sc14.68 Carica papaya
CSS0027558 Camellia sinensis var. sinensis
CSS0043780 Camellia sinensis var. sinensis
DCAR_011179 Daucus carota
Dinv33685 Davidia involucrata
Dinv35004 Davidia involucrata
Duzib187G0634 Durio zibethinus
ECA232G1410 Erigeron canadensis
Eucgr.J02159 Eucalyptus grandis
FAN02G1556 Fragaria x ananassa
FAN05G0748 Fragaria x ananassa
FAN09G3859 Fragaria x ananassa
FAN14G2712 Fragaria x ananassa
FvH4_6g49740 Fragaria vesca
Glyma.04G176300 Glycine max
Glyma.06G189000 Glycine max
Gohir.A07G216951 Gossypium hirsutum
Gohir.D07G223900 Gossypium hirsutum
Gorai.001G258300 Gossypium raimondii
GSVIVG01032574001 Vitis vinifera
HanXRQChr09g0265731 Helianthus annuus
HPP92_010494 Vanilla planifolia
Hund13295 Selenicereus undatus
Lalb_Chr10g0093331 Lupinus albus
LjContig00155g0009682 Lotus japonicus
Lsat_1_v5_gn_4_180400 Lactuca sativa
Manes.17G117200 Manihot esculenta
Manes.17G117300 Manihot esculenta
MBI15_g14830_MAGBIO Magnolia biondii
MBI15_g38192_MAGBIO Magnolia biondii
MD09G1042000 Malus domestica
MD17G1043300 Malus domestica
Medtr7g034275 Medicago truncatula
MELO3C030968.2 Cucumis melo
Migut.H00870 Erythranthe guttata
MSTRG.23970 Avicennia marina
Nitab4.5_0001239g0030 Nicotiana tabacum
Nitab4.5_0002265g0100 Nicotiana tabacum
Nn4g22956 Nelumbo nucifera
Oeu060587.1 Olea europaea
Oeu060589.1 Olea europaea
Os06g0235900 Oryza sativa ssp. japonica
Os06g0244200 Oryza sativa ssp. japonica
Peaxi162Scf00129g00734 Petunia axillaris
PGSC0003DMG400001300 Solanum tuberosum
Phvul.008G153000 Phaseolus vulgaris
Potri.001G350100 Populus trichocarpa
Potri.017G074100 Populus trichocarpa
Prupe.3G275800 Prunus persica
Psat3g038600 Pisum sativum
Psat3g176600 Pisum sativum
PSO063G2579 Papaver somniferum
QL02p079285 Quercus lobata
RcHm_v2.0_Chr2g0169771 Rosa chinensis
Rhsim07G0133700 Rhododendron simsii
Rhsim10G0029100 Rhododendron simsii
RhsimUnG0169100 Rhododendron simsii
Sabra07G0063000 Salix brachista
Sabra16G0229500 Salix brachista
Sabra17G0063300 Salix brachista
Sabra17G0065100 Salix brachista
SalBow1G8362 Salvia bowleyana
Sc11g0006840 Simmondsia chinensis
Sed0019253 Sechium edule
SGA_v2.0_scaffold135G34803 Striga asiatica
SGA_v2.0_scaffold205G41734 Striga asiatica
Solyc02g087420.3 Solanum lycopersicum
Solyc11g070183.1 Solanum lycopersicum
Sopen02g032170 Solanum pennellii
Sp2g17170 Schrenkiella parvula
THA.LOC104805424 Tarenaya hassleriana
Thecc.04G070100 Theobroma cacao
Thhalv10004882m.g Eutrema salsugineum
TPR.G30823 Trifolium pratense
TPR.G39060 Trifolium pratense
TPR.G39121 Trifolium pratense
TWI12G0421 Tripterygium wilfordii
unitig_746.g26578 Utricularia gibba
Zm00001eb280040 Zea mays

User provided reference genes

Program Settings