Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p05600 Brassica napus
Aa31LG1G8110 Aethionema arabicum
Actinidia23207 Actinidia chinensis
Actinidia32616 Actinidia chinensis
AL1G17180 Arabidopsis lyrata
Aqoxy2G00798 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IVNQ32 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QCA2Y7 Arachis hypogaea
AT1G07060 Arabidopsis thaliana
ATR0174G030 Amborella trichopoda
Atru.chr3.4133 Acer truncatum
AUR62001886 Chenopodium quinoa
AUR62009682 Chenopodium quinoa
BcaC05g24670 Brassica carinata
BcaC05g24674 Brassica carinata
BcaNung06763 Brassica carinata
BcaNung06767 Brassica carinata
BolC5t29286H Brassica oleracea
BraA10t42821Z Brassica rapa
C05p05140 Brassica napus
CANSAT54G2573 Cannabis sativa
CARHR006750 Cardamine hirsuta
Carub.0001s0635 Capsella rubella
Ca_05090_v3 Cicer arietinum L.
Ca_14995_v3 Cicer arietinum L.
Cc01_g14730 Coffea canephora
Cfa011760 Carpinus fangiana
Ciclev10029273m.g Citrus clementina
CiPaw.14G055100 Carya illinoinensis
ClCG03G000270 Citrullus lanatus
COL.COLO4_11129 Corchorus olitorius
CsaV3_1G015330 Cucumis sativus L.
CSS0017241 Camellia sinensis var. sinensis
CSS0041349 Camellia sinensis var. sinensis
DCAR_012274 Daucus carota
Dinv09663 Davidia involucrata
Dinv28687 Davidia involucrata
Duzib168G0028 Durio zibethinus
ECA247G3086 Erigeron canadensis
Eucgr.B03990 Eucalyptus grandis
FAN11G3207 Fragaria x ananassa
FAN16G2350 Fragaria x ananassa
FAN21G2638 Fragaria x ananassa
FAN25G1877 Fragaria x ananassa
FvH4_3g39530 Fragaria vesca
Glyma.18G058101 Glycine max
Gohir.A03G026100 Gossypium hirsutum
Gohir.D03G142400 Gossypium hirsutum
Gorai.003G149500 Gossypium raimondii
GSVIVG01024663001 Vitis vinifera
HanXRQChr08g0229231 Helianthus annuus
Hma1.2p1_0841F.1_g226930 Hydrangea macrophylla
Hund18956 Selenicereus undatus
Lalb_Chr15g0083171 Lupinus albus
Lalb_Chr15g0083181 Lupinus albus
Lj2A1091T48 Lonicera japonica
Lj6g0005890 Lotus japonicus
Lsat_1_v5_gn_9_18401 Lactuca sativa
Manes.17G034600 Manihot esculenta
MBI03_g33621_MAGBIO Magnolia biondii
MD11G1063300 Malus domestica
Medtr3g031680 Medicago truncatula
Medtr3g031720 Medicago truncatula
MELO3C026086.2 Cucumis melo
Migut.N00766 Erythranthe guttata
MSTRG.9779 Avicennia marina
Nitab4.5_0007880g0040 Nicotiana tabacum
Nitab4.5_0009741g0040 Nicotiana tabacum
Nn2g10986 Nelumbo nucifera
Oeu034090.2 Olea europaea
Os11g0106800 Oryza sativa ssp. japonica
Os12g0106100 Oryza sativa ssp. japonica
Peaxi162Scf00390g00079 Petunia axillaris
PGR102G0940 Punica granatum
PGSC0003DMG400030457 Solanum tuberosum
Phvul.006G073000 Phaseolus vulgaris
Potri.001G281500 Populus trichocarpa
Prupe.6G050500 Prunus persica
Psat5g153840 Pisum sativum
PSO339G1295 Papaver somniferum
PSO801G0770 Papaver somniferum
QL01p040026 Quercus lobata
RcHm_v2.0_Chr5g0071301 Rosa chinensis
Rhsim13G0065200 Rhododendron simsii
Sabra09G0058600 Salix brachista
Sabra16G0175100 Salix brachista
SalBow2G2431 Salvia bowleyana
Sc21g0005220 Simmondsia chinensis
Sed0020276 Sechium edule
SGA_v2.0_scaffold120G32948 Striga asiatica
SGA_v2.0_scaffold146G36125 Striga asiatica
SMO358G0161 Selaginella moellendorffii
Solyc06g082320.4 Solanum lycopersicum
Sopen06g033710 Solanum pennellii
Sp1g05780 Schrenkiella parvula
TAR623G0341 Trochodendron aralioides
THA.LOC104800761 Tarenaya hassleriana
Thecc.09G355900 Theobroma cacao
Thhalv10009490m.g Eutrema salsugineum
TPR.G14892 Trifolium pratense
TPR.G22099 Trifolium pratense
TPR.G32886 Trifolium pratense
TPR.G444 Trifolium pratense
TWI31G1133 Tripterygium wilfordii
unitig_94.g28350 Utricularia gibba
vmacro02927 Vaccinium macrocarpon
VMungo0540G1924 Vigna mungo
Zm00001eb025660 Zea mays
Zm00001eb195020 Zea mays

User provided reference genes

Program Settings