Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p01070 Brassica napus
Aa31LG6G14960 Aethionema arabicum
Actinidia25299 Actinidia chinensis
Ah.03g143260 Amaranthus hybridus
AL7G12620 Arabidopsis lyrata
Aqoxy6G01485 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea
AT4G38020 Arabidopsis thaliana
Atru.chr3.1215 Acer truncatum
AUR62003688 Chenopodium quinoa
AUR62014153 Chenopodium quinoa
AUR62018000 Chenopodium quinoa
AUR62043608 Chenopodium quinoa
BcaNung00953 Brassica carinata
BcaNung05371 Brassica carinata
BolC1t00117H Brassica oleracea
BraA01t00105Z Brassica rapa
C01p01190 Brassica napus
CAN.G1771.10 Capsicum annuum
CANSAT01G2982 Cannabis sativa
CARHR246430 Cardamine hirsuta
Carub.0007s0220 Capsella rubella
Ca_22623_v3 Cicer arietinum L.
Cc00_g34880 Coffea canephora
Cc07_g13860 Coffea canephora
Cc07_g13870 Coffea canephora
CDE04G1458 Ceratophyllum demersum
Cfa006863 Carpinus fangiana
Ciclev10025907m.g Citrus clementina
CiPaw.07G045700 Carya illinoinensis
ClCG10G008240 Citrullus lanatus
COL.COLO4_27378 Corchorus olitorius
Cpa.g.sc55.6 Carica papaya
Cre17.g744947 Chlamydomonas reinhardtii
CsaV3_3G006990 Cucumis sativus L.
CSS0007107 Camellia sinensis var. sinensis
CSS0022959 Camellia sinensis var. sinensis
CSS0046556 Camellia sinensis var. sinensis
DCAR_003441 Daucus carota
Dinv13563 Davidia involucrata
Dinv36956 Davidia involucrata
Duzib147G1243 Durio zibethinus
Eucgr.H02435 Eucalyptus grandis
FAN19G0835 Fragaria x ananassa
FAN19G2137 Fragaria x ananassa
FvH4_1g19321 Fragaria vesca
Glyma.08G276900 Glycine max
Gohir.A11G207400 Gossypium hirsutum
Gohir.D11G215700 Gossypium hirsutum
Gorai.007G232000 Gossypium raimondii
GSVIVG01003951001 Vitis vinifera
HanXRQChr09g0259541 Helianthus annuus
Haze_03901 Corylus avellana
HPP92_014152 Vanilla planifolia
HPP92_014172 Vanilla planifolia
Lalb_Chr16g0392111 Lupinus albus
Lj2A526T20 Lonicera japonica
Lj4g0026970 Lotus japonicus
Lsat_1_v5_gn_4_142441 Lactuca sativa
Manes.13G092280 Manihot esculenta
Manes.13G101800 Manihot esculenta
Mapoly0036s0111 Marchantia polymorpha
MBI16_g30311_MAGBIO Magnolia biondii
MCO07G132 Micromonas commoda
MD01G1041100 Malus domestica
Medtr8g068220 Medicago truncatula
MELO3C014951.2 Cucumis melo
Migut.H02278 Erythranthe guttata
MSTRG.23388 Avicennia marina
Nitab4.5_0000402g0060 Nicotiana tabacum
Nitab4.5_0005446g0010 Nicotiana tabacum
Nn5g29827 Nelumbo nucifera
Oeu017115.1 Olea europaea
Os03g0685100 Oryza sativa ssp. japonica
Peaxi162Scf00085g00523 Petunia axillaris
PGR102G1719 Punica granatum
PGSC0003DMG400016118 Solanum tuberosum
Phvul.003G287700 Phaseolus vulgaris
Potri.005G147600 Populus trichocarpa
Pp3c5_6200 Physcomitrium patens
Pp3c5_6210 Physcomitrium patens
PRCOL_00003319 Prasinoderma coloniale
Prupe.6G204900 Prunus persica
Psat4g117600 Pisum sativum
PSO541G2681 Papaver somniferum
PSO675G0552 Papaver somniferum
QL06p036361 Quercus lobata
RcHm_v2.0_Chr2g0110691 Rosa chinensis
RcHm_v2.0_Chr6g0269301 Rosa chinensis
Sabra05G0118000 Salix brachista
SalBow3G4077 Salvia bowleyana
Sc03g0000490 Simmondsia chinensis
Sed0016887 Sechium edule
SEGI_29034 Sequoiadendron giganteum
SEGI_38116 Sequoiadendron giganteum
SGA_v2.0_scaffold108G30936 Striga asiatica
SMO364G0498 Selaginella moellendorffii
Solyc11g010900.2 Solanum lycopersicum
Sopen11g005640 Solanum pennellii
Sp7g35660 Schrenkiella parvula
THA.LOC104804178 Tarenaya hassleriana
Thecc.01G088100 Theobroma cacao
Thhalv10025567m.g Eutrema salsugineum
TPR.G29816 Trifolium pratense
TWI74G0882 Tripterygium wilfordii
unitig_27.g25347 Utricularia gibba
vmacro13023 Vaccinium macrocarpon
VMungo0251G2065 Vigna mungo
Zm00001eb053350 Zea mays

User provided reference genes

Program Settings