Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p18740 Brassica napus
A07p29800 Brassica napus
Aa31LG4G3710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.159 Anthoceros agrestis
Actinidia34651 Actinidia chinensis
AL2G33240 Arabidopsis lyrata
Aqoxy3G04047 Aquilegia oxysepala
Aqoxy3G04293 Aquilegia oxysepala
Aqoxy3G04295 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RE1P9T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZBK6XN Arachis hypogaea
AT1G73470 Arabidopsis thaliana
ATR0598G346 Amborella trichopoda
Atru.chr9.1590 Acer truncatum
BolC2t09155H Brassica oleracea
BraA02t06916Z Brassica rapa
BraA07t30618Z Brassica rapa
C02p31110 Brassica napus
C06p34010 Brassica napus
CAN.G637.26 Capsicum annuum
CARHR066500 Cardamine hirsuta
Carub.0002s2020 Capsella rubella
Cc04_g09730 Coffea canephora
CDE11G1050 Ceratophyllum demersum
Cfa020663 Carpinus fangiana
Ciclev10020853m.g Citrus clementina
CiPaw.15G149500 Carya illinoinensis
ClCG04G010390 Citrullus lanatus
Cpa.g.sc7.111 Carica papaya
Cpa.g.sc7.112 Carica papaya
Cre09.g407450 Chlamydomonas reinhardtii
CsaV3_1G007400 Cucumis sativus L.
DCAR_014735 Daucus carota
Dinv19316 Davidia involucrata
ECA238G2937 Erigeron canadensis
EL10Ac8g19490 Beta vulgaris
Eucgr.H00587 Eucalyptus grandis
FAN08G0101 Fragaria x ananassa
FAN08G2087 Fragaria x ananassa
FAN13G0144 Fragaria x ananassa
FAN18G0372 Fragaria x ananassa
FvH4_5g17910 Fragaria vesca
Glyma.08G057000 Glycine max
Gohir.A07G061100 Gossypium hirsutum
Gohir.D07G065800 Gossypium hirsutum
Gorai.001G069400 Gossypium raimondii
GSVIVG01000394001 Vitis vinifera
HanXRQChr01g0002671 Helianthus annuus
Haze_18954 Corylus avellana
Hma1.2p1_0471F.1_g159280 Hydrangea macrophylla
Hma1.2p1_0471F.1_g159290 Hydrangea macrophylla
HPP92_016177 Vanilla planifolia
HPP92_026739 Vanilla planifolia
Hund22370 Selenicereus undatus
Lalb_Chr16g0386871 Lupinus albus
Lj5C164T17 Lonicera japonica
LjContig00484g0006565 Lotus japonicus
Lsat_1_v5_gn_2_15080 Lactuca sativa
Lsat_1_v5_gn_3_52400 Lactuca sativa
Lsat_1_v5_gn_7_15721 Lactuca sativa
Lsat_1_v5_gn_9_124440 Lactuca sativa
Manes.14G173900 Manihot esculenta
Mapoly0047s0078 Marchantia polymorpha
MD06G1234700 Malus domestica
MD14G1241900 Malus domestica
MELO3C002156.2 Cucumis melo
Migut.O00232 Erythranthe guttata
MSTRG.10865 Avicennia marina
MSTRG.10866 Avicennia marina
MSTRG.11527 Avicennia marina
Nitab4.5_0000021g0400 Nicotiana tabacum
Nitab4.5_0000936g0080 Nicotiana tabacum
Nitab4.5_0004454g0040 Nicotiana tabacum
Nn4g24583 Nelumbo nucifera
Os09g0448900 Oryza sativa ssp. japonica
Peaxi162Scf00171g00732 Petunia axillaris
PGR083G1346 Punica granatum
PGSC0003DMG400031050 Solanum tuberosum
Phvul.002G332600 Phaseolus vulgaris
Potri.015G033200 Populus trichocarpa
Pp3c24_15180 Physcomitrium patens
PRCOL_00002241 Prasinoderma coloniale
Prupe.5G239500 Prunus persica
Psat7g000640 Pisum sativum
PSO063G6433 Papaver somniferum
PSO782G3824 Papaver somniferum
QL10p033296 Quercus lobata
QL93p0156_0017 Quercus lobata
RcHm_v2.0_Chr6g0283931 Rosa chinensis
RcHm_v2.0_Chr7g0177701 Rosa chinensis
Rhsim08G0113600 Rhododendron simsii
Sabra15G0027300 Salix brachista
SalBow5G2942 Salvia bowleyana
Sc10g0008990 Simmondsia chinensis
Sed0020940 Sechium edule
SEGI_30595 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27781 Striga asiatica
SMO134G0127 Selaginella moellendorffii
SMO137G0317 Selaginella moellendorffii
Solyc03g098110.4 Solanum lycopersicum
Sopen03g028810 Solanum pennellii
Sp5g28650 Schrenkiella parvula
TAR629G1287 Trochodendron aralioides
Thecc.03G067300 Theobroma cacao
Thhalv10018766m.g Eutrema salsugineum
TPR.G1397 Trifolium pratense
TWI15G0155 Tripterygium wilfordii
vmacro17853 Vaccinium macrocarpon
VMungo0251G3256 Vigna mungo
Zm00001eb314540 Zea mays

User provided reference genes

Program Settings