Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia05600 Actinidia chinensis
Aqoxy1G01214 Aquilegia oxysepala
Aqoxy4G01278 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5HQW77 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D3DKTB Arachis hypogaea
ATR0693G421 Amborella trichopoda
Atru.chr10.1968 Acer truncatum
AUR62016938 Chenopodium quinoa
Ca_00300_v3 Cicer arietinum L.
Cfa000387 Carpinus fangiana
Ciclev10017305m.g Citrus clementina
Ciclev10033499m.g Citrus clementina
CiPaw.09G053500 Carya illinoinensis
CiPaw.10G045100 Carya illinoinensis
ClCG01G022750 Citrullus lanatus
ClCG03G005660 Citrullus lanatus
COL.COLO4_31534 Corchorus olitorius
COL.COLO4_33132 Corchorus olitorius
Cpa.g.c35461 Carica papaya
Cpa.g.sc27.90 Carica papaya
CsaV3_1G011920 Cucumis sativus L.
DCAR_008059 Daucus carota
DCAR_023469 Daucus carota
DCAR_026882 Daucus carota
EL10Ac8g20292 Beta vulgaris
Eucgr.E03362 Eucalyptus grandis
Eucgr.J00338 Eucalyptus grandis
FAN05G3455 Fragaria x ananassa
FAN09G3112 Fragaria x ananassa
FAN11G2592 Fragaria x ananassa
FAN14G1513 Fragaria x ananassa
FAN16G0756 Fragaria x ananassa
FAN21G1120 Fragaria x ananassa
FAN25G2721 Fragaria x ananassa
FvH4_3g04560 Fragaria vesca
FvH4_6g14200 Fragaria vesca
Glyma.13G243800 Glycine max
Glyma.15G069900 Glycine max
Gohir.1Z049398 Gossypium hirsutum
Gohir.A03G167650 Gossypium hirsutum
Gohir.A05G163200 Gossypium hirsutum
Gohir.A09G071400 Gossypium hirsutum
Gohir.A10G022900 Gossypium hirsutum
Gohir.A12G132900 Gossypium hirsutum
Gohir.D02G190750 Gossypium hirsutum
Gohir.D05G166000 Gossypium hirsutum
Gohir.D09G071200 Gossypium hirsutum
Gohir.D10G023700 Gossypium hirsutum
Gohir.D12G136400 Gossypium hirsutum
Gorai.005G213500 Gossypium raimondii
Gorai.006G086100 Gossypium raimondii
Gorai.008G147600 Gossypium raimondii
Gorai.009G171200 Gossypium raimondii
Gorai.011G024800 Gossypium raimondii
HanXRQChr09g0263951 Helianthus annuus
Haze_06539 Corylus avellana
Hma1.2p1_0835F.1_g225880 Hydrangea macrophylla
HPP92_026002 Vanilla planifolia
Lalb_Chr02g0143761 Lupinus albus
Lalb_Chr15g0089951 Lupinus albus
Lalb_Chr18g0059811 Lupinus albus
Lalb_Chr20g0122101 Lupinus albus
Lalb_Chr21g0307091 Lupinus albus
Lj4g0016899 Lotus japonicus
Lj6g0018466 Lotus japonicus
Lsat_1_v5_gn_7_20060 Lactuca sativa
Manes.04G161900 Manihot esculenta
Manes.16G023500 Manihot esculenta
Manes.17G041400 Manihot esculenta
MBI18_g13206_MAGBIO Magnolia biondii
MD05G1322400 Malus domestica
Medtr2g012800 Medicago truncatula
MELO3C002569.2 Cucumis melo
MELO3C007306.2 Cucumis melo
Migut.H01502 Erythranthe guttata
Migut.M01165 Erythranthe guttata
Nn1g03963 Nelumbo nucifera
Nn3g18559 Nelumbo nucifera
Oeu053961.1 Olea europaea
PGSC0003DMG400005083 Solanum tuberosum
PGSC0003DMG400025313 Solanum tuberosum
Phvul.006G189400 Phaseolus vulgaris
Phvul.007G012800 Phaseolus vulgaris
Potri.004G037500 Populus trichocarpa
Potri.007G000801 Populus trichocarpa
Potri.011G046112 Populus trichocarpa
Prupe.4G040400 Prunus persica
Psat1g206960 Pisum sativum
PSO210G6717 Papaver somniferum
QL01p000564 Quercus lobata
QL09p032521 Quercus lobata
RcHm_v2.0_Chr5g0007481 Rosa chinensis
Rhsim13G0175900 Rhododendron simsii
Sabra04G0022700 Salix brachista
Sabra11G0031900 Salix brachista
Sc17g0006400 Simmondsia chinensis
Sed0006501 Sechium edule
Sed0016146 Sechium edule
Sed0025622 Sechium edule
SGA_v2.0_scaffold22G09753 Striga asiatica
SHI02104 Sapria himalayana
Sopen03g002590 Solanum pennellii
TAR629G0868 Trochodendron aralioides
Thecc.02G153300 Theobroma cacao
Thecc.06G194500 Theobroma cacao
TPR.G36776 Trifolium pratense
TPR.G4098 Trifolium pratense
unitig_21.g20222 Utricularia gibba
unitig_26.g9366 Utricularia gibba
unitig_744.g24533 Utricularia gibba

User provided reference genes

Program Settings