Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AagrBONN_evm.TU.Sc2ySwM_117.3060 Anthoceros agrestis
Actinidia01436 Actinidia chinensis
Actinidia09880 Actinidia chinensis
Actinidia39436 Actinidia chinensis
Aqoxy1G02644 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B6W742 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CVYZ1N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EK8XNT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R2A86L Arachis hypogaea
ATR0693G416 Amborella trichopoda
ATR0796G263 Amborella trichopoda
CAN.G168.28 Capsicum annuum
CAN.G996.14 Capsicum annuum
CANSAT35G0251 Cannabis sativa
Ca_00299_v3 Cicer arietinum L.
Cc00_g11490 Coffea canephora
Cc05_g06690 Coffea canephora
Cfa000386 Carpinus fangiana
Ciclev10017704m.g Citrus clementina
CiPaw.09G053400 Carya illinoinensis
ClCG02G001190 Citrullus lanatus
COL.COLO4_31536 Corchorus olitorius
COL.COLO4_35412 Corchorus olitorius
Cpa.g.sc34.121 Carica papaya
CsaV3_7G004260 Cucumis sativus L.
DCAR_021231 Daucus carota
Dinv03840 Davidia involucrata
Dinv40521 Davidia involucrata
Duzib235G0436 Durio zibethinus
ECA234G1429 Erigeron canadensis
Eucgr.D00687 Eucalyptus grandis
Eucgr.D00692 Eucalyptus grandis
Eucgr.E03363 Eucalyptus grandis
Eucgr.L02005 Eucalyptus grandis
FvH4_3g27971 Fragaria vesca
Glyma.13G243900 Glycine max
Glyma.15G069800 Glycine max
Gohir.A03G158800 Gossypium hirsutum
Gohir.A05G163250 Gossypium hirsutum
Gohir.A10G022800 Gossypium hirsutum
Gohir.D02G181900 Gossypium hirsutum
Gohir.D05G166200 Gossypium hirsutum
Gohir.D10G023600 Gossypium hirsutum
Gorai.005G204400 Gossypium raimondii
Gorai.009G171300 Gossypium raimondii
Gorai.011G024700 Gossypium raimondii
GSVIVG01006336001 Vitis vinifera
GSVIVG01006947001 Vitis vinifera
GSVIVG01030561001 Vitis vinifera
HanXRQChr05g0140521 Helianthus annuus
HanXRQChr16g0517841 Helianthus annuus
Haze_06540 Corylus avellana
Haze_13111 Corylus avellana
Hma1.2p1_0191F.1_g083390 Hydrangea macrophylla
Lj2P283T62 Lonicera japonica
Lj6g0020427 Lotus japonicus
Lj8A115T58 Lonicera japonica
Manes.13G149600 Manihot esculenta
Manes.16G023400 Manihot esculenta
Mapoly0811s0002 Marchantia polymorpha
MBI02_g37921_MAGBIO Magnolia biondii
MD05G1322500 Malus domestica
MD10G1300400 Malus domestica
Medtr2g012790 Medicago truncatula
MELO3C018752.2 Cucumis melo
Migut.H01046 Erythranthe guttata
Migut.M01164 Erythranthe guttata
Nitab4.5_0001820g0090 Nicotiana tabacum
Nitab4.5_0001871g0020 Nicotiana tabacum
Nitab4.5_0002370g0040 Nicotiana tabacum
Nitab4.5_0007319g0020 Nicotiana tabacum
Oeu038241.1 Olea europaea
Oeu058749.1 Olea europaea
Os02g0805400 Oryza sativa ssp. japonica
Peaxi162Scf00007g00283 Petunia axillaris
Peaxi162Scf00608g00919 Petunia axillaris
Peaxi162Scf00812g00041 Petunia axillaris
PGR004G0270 Punica granatum
PGR042G2243 Punica granatum
PGSC0003DMG400042494 Solanum tuberosum
PGSC0003DMG400045796 Solanum tuberosum
Phvul.006G189500 Phaseolus vulgaris
Potri.004G037400 Populus trichocarpa
Potri.011G046100 Populus trichocarpa
Prupe.4G040300 Prunus persica
Psat1g207000 Pisum sativum
PSO541G4014 Papaver somniferum
PSO675G2267 Papaver somniferum
RcHm_v2.0_Chr5g0007471 Rosa chinensis
Sabra19G0114400 Salix brachista
Sed0021459 Sechium edule
Sed0026806 Sechium edule
SEGI_07341 Sequoiadendron giganteum
SMO358G0266 Selaginella moellendorffii
Solyc02g078710.1 Solanum lycopersicum
Solyc07g054570.1 Solanum lycopersicum
Solyc08g068470.1 Solanum lycopersicum
Solyc10g008530.1 Solanum lycopersicum
Sopen02g023560 Solanum pennellii
TAR629G0430 Trochodendron aralioides
Thecc.02G174600 Theobroma cacao
Thecc.06G194600 Theobroma cacao
TPR.G36730 Trifolium pratense
TPR.G36795 Trifolium pratense
TWI38G0385 Tripterygium wilfordii
TWI63G1715 Tripterygium wilfordii
VMungo0540G0277 Vigna mungo
Zm00001eb258250 Zea mays
Zm00001eb426430 Zea mays
Zm00001eb429700 Zea mays

User provided reference genes

Program Settings