Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p10660 Brassica napus
Aa31sc441G10 Aethionema arabicum
Aa31sc715G20 Aethionema arabicum
Actinidia20025 Actinidia chinensis
Ah.13g071480 Amaranthus hybridus
AL3G45300 Arabidopsis lyrata
Aqoxy5G03254 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.51T3ZK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5SK0BH Arachis hypogaea
ATR0827G081 Amborella trichopoda
Atru.chr4.863 Acer truncatum
AUR62000508 Chenopodium quinoa
AUR62006853 Chenopodium quinoa
BcaB03g13884 Brassica carinata
BcaC06g35432 Brassica carinata
BolC7t42120H Brassica oleracea
BraA07t28860Z Brassica rapa
C07p16260 Brassica napus
CAN.G479.71 Capsicum annuum
CAN.G930.13 Capsicum annuum
CANSAT80G1767 Cannabis sativa
CARHR105140 Cardamine hirsuta
Carub.0003s2794 Capsella rubella
Cc02_g29420 Coffea canephora
CDE02G2213 Ceratophyllum demersum
CDE09G1117 Ceratophyllum demersum
Cfa007278 Carpinus fangiana
Ciclev10000792m.g Citrus clementina
CiPaw.03G118400 Carya illinoinensis
ClCG04G002180 Citrullus lanatus
ClCG05G017120 Citrullus lanatus
COL.COLO4_06474 Corchorus olitorius
Cpa.g.sc332.2 Carica papaya
Cpa.g.sc81.83 Carica papaya
CsaV3_4G030520 Cucumis sativus L.
CSS0029634 Camellia sinensis var. sinensis
CSS0050477 Camellia sinensis var. sinensis
DCAR_019060 Daucus carota
Dinv05942 Davidia involucrata
Duzib106G1191 Durio zibethinus
Duzib128G0705 Durio zibethinus
EL10Ac4g09612 Beta vulgaris
Eucgr.C01536 Eucalyptus grandis
Eucgr.H05142 Eucalyptus grandis
Eucgr.H05146 Eucalyptus grandis
FAN02G2250 Fragaria x ananassa
FAN09G1196 Fragaria x ananassa
FAN14G5374 Fragaria x ananassa
FvH4_6g24130 Fragaria vesca
Glyma.02G271600 Glycine max
Glyma.14G044600 Glycine max
Gohir.A10G194200 Gossypium hirsutum
Gohir.D10G201300 Gossypium hirsutum
Gorai.011G226000 Gossypium raimondii
GSVIVG01026463001 Vitis vinifera
HanXRQChr13g0423691 Helianthus annuus
Haze_14814 Corylus avellana
HPP92_016385 Vanilla planifolia
Lalb_Chr18g0048891 Lupinus albus
Lj3g0003939 Lotus japonicus
Lj7P528T36 Lonicera japonica
Lsat_1_v5_gn_3_126181 Lactuca sativa
Manes.12G158300 Manihot esculenta
Manes.15G186000 Manihot esculenta
MD17G1234700 Malus domestica
Medtr3g008430 Medicago truncatula
MELO3C033379.2 Cucumis melo
Migut.D00798 Erythranthe guttata
MSTRG.18528 Avicennia marina
Nitab4.5_0000923g0180 Nicotiana tabacum
Nitab4.5_0002209g0140 Nicotiana tabacum
Nitab4.5_0005086g0050 Nicotiana tabacum
Nitab4.5_0007292g0010 Nicotiana tabacum
Nn6g33908 Nelumbo nucifera
Oeu014607.1 Olea europaea
Os08g0369200 Oryza sativa ssp. japonica
Peaxi162Scf00231g00042 Petunia axillaris
PGR102G1884 Punica granatum
PGSC0003DMG401009781 Solanum tuberosum
Phvul.009G215700 Phaseolus vulgaris
Potri.005G066700 Populus trichocarpa
Prupe.3G134300 Prunus persica
Psat5g227600 Pisum sativum
PSO017G0572 Papaver somniferum
PSO478G2658 Papaver somniferum
QL10p041753 Quercus lobata
RcHm_v2.0_Chr3g0483111 Rosa chinensis
RcHm_v2.0_Chr3g0483141 Rosa chinensis
Rhsim08G0188000 Rhododendron simsii
Sabra18G0034700 Salix brachista
SalBow7G3017 Salvia bowleyana
Sc09g0002270 Simmondsia chinensis
Sed0008418 Sechium edule
SEGI_15364 Sequoiadendron giganteum
SGA_v2.0_scaffold158G37440 Striga asiatica
SHI36066 Sapria himalayana
Solyc10g049570.3 Solanum lycopersicum
Sopen10g021030 Solanum pennellii
Sp3g26890 Schrenkiella parvula
TAR383G0679 Trochodendron aralioides
THA.LOC104819486 Tarenaya hassleriana
Thecc.10G126300 Theobroma cacao
Thhalv10022652m.g Eutrema salsugineum
TPR.G10977 Trifolium pratense
TWI79G0596 Tripterygium wilfordii
unitig_0.g2153 Utricularia gibba
unitig_46.g18532 Utricularia gibba
vmacro19218 Vaccinium macrocarpon
VMungo1215G1169 Vigna mungo
Zm00001eb256370 Zea mays

User provided reference genes

Program Settings