Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p12790 Brassica napus
Aa31LG3G6930 Aethionema arabicum
Actinidia18344 Actinidia chinensis
Ah.02g111120 Amaranthus hybridus
AL8G24630 Arabidopsis lyrata
Aqoxy3G00802 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea
AT5G50410 Arabidopsis thaliana
Atru.chr9.1127 Acer truncatum
AUR62029615 Chenopodium quinoa
BcaB05g24052 Brassica carinata
BcaC03g14651 Brassica carinata
BolC2t08225H Brassica oleracea
BraA02t06336Z Brassica rapa
C02p20850 Brassica napus
CAN.G338.2 Capsicum annuum
CANSAT80G0844 Cannabis sativa
CANSAT80G1416 Cannabis sativa
CARHR257950 Cardamine hirsuta
Carub.0008s1052 Capsella rubella
Ca_16044_v3 Cicer arietinum L.
Cc06_g22780 Coffea canephora
Cfa018798 Carpinus fangiana
CiPaw.12G042700 Carya illinoinensis
ClCG03G003730 Citrullus lanatus
COL.COLO4_28120 Corchorus olitorius
Cpa.g.sc13.118 Carica papaya
CsaV3_1G009620 Cucumis sativus L.
CSS0048648 Camellia sinensis var. sinensis
DCAR_016391 Daucus carota
DCAR_021617 Daucus carota
Dinv23144 Davidia involucrata
Duzib068G0521 Durio zibethinus
ECA247G3219 Erigeron canadensis
EL10Ac5g11418 Beta vulgaris
Eucgr.K02727 Eucalyptus grandis
FAN04G2393 Fragaria x ananassa
FAN08G0105 Fragaria x ananassa
FAN18G0310 Fragaria x ananassa
FvH4_5g08300 Fragaria vesca
Glyma.06G170200 Glycine max
Gohir.A09G246900 Gossypium hirsutum
Gohir.D08G258666 Gossypium hirsutum
Gohir.D09G247400 Gossypium hirsutum
Gohir.D12G191801 Gossypium hirsutum
Gorai.004G276100 Gossypium raimondii
Gorai.006G271900 Gossypium raimondii
Gorai.008G206100 Gossypium raimondii
HanXRQChr02g0034741 Helianthus annuus
Haze_07134 Corylus avellana
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla
HPP92_011766 Vanilla planifolia
HPP92_011770 Vanilla planifolia
Hund26053 Selenicereus undatus
Lalb_Chr08g0237141 Lupinus albus
Lalb_Chr23g0273701 Lupinus albus
Lj1g0026378 Lotus japonicus
Lj5A96T48 Lonicera japonica
Lsat_1_v5_gn_1_28980 Lactuca sativa
Manes.01G190300 Manihot esculenta
MD06G1142100 Malus domestica
MD14G1157400 Malus domestica
Medtr2g045120 Medicago truncatula
Medtr2g445400 Medicago truncatula
Medtr3g099350 Medicago truncatula
MELO3C002358.2 Cucumis melo
Migut.I00155 Erythranthe guttata
MSTRG.11390 Avicennia marina
Nitab4.5_0011992g0030 Nicotiana tabacum
Nn3g16473 Nelumbo nucifera
Oeu006492.1 Olea europaea
Peaxi162Scf00089g01624 Petunia axillaris
PGR044G0546 Punica granatum
PGSC0003DMG400018172 Solanum tuberosum
Phvul.009G166500 Phaseolus vulgaris
Potri.012G097500 Populus trichocarpa
Potri.015G096000 Populus trichocarpa
Prupe.5G151300 Prunus persica
Psat5g051240 Pisum sativum
PSO017G4677 Papaver somniferum
PSO478G3704 Papaver somniferum
QL10p002966 Quercus lobata
RcHm_v2.0_Chr7g0190221 Rosa chinensis
Rhsim08G0190100 Rhododendron simsii
RhsimUnG0231000 Rhododendron simsii
Sabra15G0116800 Salix brachista
SalBow5G3517 Salvia bowleyana
SalBow5G4624 Salvia bowleyana
Sc04g0000670 Simmondsia chinensis
Sed0005692 Sechium edule
Sed0023866 Sechium edule
SEGI_24222 Sequoiadendron giganteum
SGA_v2.0_scaffold56G20032 Striga asiatica
Solyc03g112570.2 Solanum lycopersicum
Sopen03g031630 Solanum pennellii
Sp6g12560 Schrenkiella parvula
SpUn0015_0080 Schrenkiella parvula
SpUn0039_0020 Schrenkiella parvula
TAR371G0734 Trochodendron aralioides
TAR374G1569 Trochodendron aralioides
TAR622G0369 Trochodendron aralioides
THA.LOC104803148 Tarenaya hassleriana
Thecc.03G128900 Theobroma cacao
Thhalv10014456m.g Eutrema salsugineum
TPR.G14220 Trifolium pratense
TWI23G0849 Tripterygium wilfordii
unitig_0.g2530 Utricularia gibba
vmacro07808 Vaccinium macrocarpon
VMungo1309G2045 Vigna mungo

User provided reference genes

Program Settings