Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p38240 Brassica napus
Aa31LG11G8430 Aethionema arabicum
Actinidia18474 Actinidia chinensis
Ah.07g201630 Amaranthus hybridus
AL8G23420 Arabidopsis lyrata
Aqoxy2G00196 Aquilegia oxysepala
Aqoxy2G02919 Aquilegia oxysepala
Aqoxy6G01018 Aquilegia oxysepala
Aqoxy6G01072 Aquilegia oxysepala
AT5G49610 Arabidopsis thaliana
ATR0580G250 Amborella trichopoda
ATR0693G387 Amborella trichopoda
ATR1048G001 Amborella trichopoda
ATR1073G001 Amborella trichopoda
Atru.chr4.3114 Acer truncatum
AUR62016246 Chenopodium quinoa
AUR62022433 Chenopodium quinoa
AUR62032769 Chenopodium quinoa
AUR62032772 Chenopodium quinoa
BcaB07g34165 Brassica carinata
BcaC03g17742 Brassica carinata
BcaC06g30717 Brassica carinata
BcaNung05953 Brassica carinata
BolC2t11828H Brassica oleracea
BraA02t08804Z Brassica rapa
C02p57550 Brassica napus
CAN.G484.72 Capsicum annuum
CANSAT78G1184 Cannabis sativa
Carub.0008s0947 Capsella rubella
Ca_00957_v3 Cicer arietinum L.
Cc03_g00510 Coffea canephora
Cfa015679 Carpinus fangiana
Ciclev10005014m.g Citrus clementina
CiPaw.01G134400 Carya illinoinensis
COL.COLO4_34567 Corchorus olitorius
CSS0000127 Camellia sinensis var. sinensis
CSS0043507 Camellia sinensis var. sinensis
DCAR_023374 Daucus carota
Dinv15135 Davidia involucrata
Duzib151G0437 Durio zibethinus
Duzib212G0788 Durio zibethinus
EL10Ac1g01146 Beta vulgaris
EL10Ac3g05554 Beta vulgaris
Eucgr.B03982 Eucalyptus grandis
Eucgr.J00831 Eucalyptus grandis
FAN07G2689 Fragaria x ananassa
FAN12G3043 Fragaria x ananassa
FvH4_4g20690 Fragaria vesca
Glyma.09G032600 Glycine max
Glyma.15G137700 Glycine max
Gohir.A01G035600 Gossypium hirsutum
Gohir.A10G174800 Gossypium hirsutum
Gohir.D01G023577 Gossypium hirsutum
Gohir.D10G181300 Gossypium hirsutum
Gorai.002G031500 Gossypium raimondii
Gorai.011G202800 Gossypium raimondii
GSVIVG01034950001 Vitis vinifera
HanXRQChr11g0353911 Helianthus annuus
Haze_00858 Corylus avellana
Hma1.2p1_0013F.1_g008260 Hydrangea macrophylla
Hma1.2p1_0516F.1_g170520 Hydrangea macrophylla
HPP92_017256 Vanilla planifolia
Lalb_Chr15g0089091 Lupinus albus
Lalb_Chr18g0058531 Lupinus albus
Lalb_Chr20g0120651 Lupinus albus
Lj3P834T54 Lonicera japonica
Lj6g0014268 Lotus japonicus
Lj6P694T44 Lonicera japonica
Lsat_1_v5_gn_1_40801 Lactuca sativa
Manes.03G207900 Manihot esculenta
MD13G1148700 Malus domestica
MD16G1149000 Malus domestica
Medtr2g033410 Medicago truncatula
Migut.G00030 Erythranthe guttata
Migut.G00033 Erythranthe guttata
MSTRG.10171 Avicennia marina
Nitab4.5_0002150g0050 Nicotiana tabacum
Nitab4.5_0002294g0120 Nicotiana tabacum
Nn4g25520 Nelumbo nucifera
Oeu004105.1 Olea europaea
Oeu046586.1 Olea europaea
Peaxi162Scf01160g00150 Petunia axillaris
PGR031G2441 Punica granatum
PGSC0003DMG400004614 Solanum tuberosum
Phvul.006G120400 Phaseolus vulgaris
Potri.010G149000 Populus trichocarpa
Prupe.1G112700 Prunus persica
Psat1g162520 Pisum sativum
PSO170G0624 Papaver somniferum
PSO210G4175 Papaver somniferum
QL06p013113 Quercus lobata
QL12p005934 Quercus lobata
RcHm_v2.0_Chr4g0426111 Rosa chinensis
Rhsim04G0242300 Rhododendron simsii
Sabra10G0115000 Salix brachista
SalBow8G4721 Salvia bowleyana
Sc13g0007060 Simmondsia chinensis
SGA_v2.0_scaffold157G37347 Striga asiatica
Solyc12g099170.3 Solanum lycopersicum
Sopen12g033850 Solanum pennellii
Sp2g19920 Schrenkiella parvula
TAR362G1081 Trochodendron aralioides
THA.LOC104818869 Tarenaya hassleriana
Thecc.04G306200 Theobroma cacao
Thhalv10004464m.g Eutrema salsugineum
TPR.G33885 Trifolium pratense
TWI09G0041 Tripterygium wilfordii
unitig_0.g2579 Utricularia gibba
vmacro07965 Vaccinium macrocarpon
VMungo0540G1379 Vigna mungo

User provided reference genes

Program Settings