Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia12482 Actinidia chinensis
Actinidia29255 Actinidia chinensis
Aqoxy4G02532 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.ABE34K Arachis hypogaea
ATR0804G053 Amborella trichopoda
Atru.chr6.3108 Acer truncatum
CAN.G86.35 Capsicum annuum
Ca_01559_v3 Cicer arietinum L.
Ca_21674_v3 Cicer arietinum L.
Ca_26200_v3 Cicer arietinum L.
Cc05_g05520 Coffea canephora
Cfa014479 Carpinus fangiana
Ciclev10017232m.g Citrus clementina
CiPaw.03G165400 Carya illinoinensis
CiPaw.04G120100 Carya illinoinensis
ClCG02G001520 Citrullus lanatus
ClCG02G011170 Citrullus lanatus
COL.COLO4_13040 Corchorus olitorius
COL.COLO4_31669 Corchorus olitorius
Cpa.g.sc34.47 Carica papaya
CsaV3_6G012600 Cucumis sativus L.
CsaV3_7G003930 Cucumis sativus L.
CSS0000680 Camellia sinensis var. sinensis
CSS0008619 Camellia sinensis var. sinensis
CSS0043735 Camellia sinensis var. sinensis
CSS0048777 Camellia sinensis var. sinensis
Dinv18559 Davidia involucrata
Dinv18957 Davidia involucrata
Eucgr.A01740 Eucalyptus grandis
FAN02G1242 Fragaria x ananassa
FAN05G2387 Fragaria x ananassa
FAN09G0550 Fragaria x ananassa
FAN14G5947 Fragaria x ananassa
FvH4_6g43890 Fragaria vesca
Glyma.06G301200 Glycine max
Glyma.12G103200 Glycine max
Glyma.13G304200 Glycine max
Gohir.A03G162600 Gossypium hirsutum
Gohir.A04G106700 Gossypium hirsutum
Gohir.D02G185700 Gossypium hirsutum
Gohir.D04G146551 Gossypium hirsutum
Gorai.005G208200 Gossypium raimondii
Gorai.012G132600 Gossypium raimondii
Haze_12992 Corylus avellana
Hma1.2p1_0712F.1_g207550 Hydrangea macrophylla
Lalb_Chr24g0393601 Lupinus albus
Lj3g0000666 Lotus japonicus
Lj3g0015957 Lotus japonicus
Manes.12G077701 Manihot esculenta
MBI02_g42365_MAGBIO Magnolia biondii
MBI02_g42366_MAGBIO Magnolia biondii
MBI02_g43088_MAGBIO Magnolia biondii
MBI02_g43089_MAGBIO Magnolia biondii
MBI18_g20355_MAGBIO Magnolia biondii
MBI18_g38397_MAGBIO Magnolia biondii
MD09G1102100 Malus domestica
MD09G1127500 Malus domestica
Medtr0945s0020 Medicago truncatula
Medtr2g089190 Medicago truncatula
MELO3C019764.2 Cucumis melo
Migut.M00380 Erythranthe guttata
MSTRG.6540 Avicennia marina
Nitab4.5_0001134g0060 Nicotiana tabacum
Nitab4.5_0001302g0030 Nicotiana tabacum
Nitab4.5_0005140g0010 Nicotiana tabacum
Nitab4.5_0009996g0020 Nicotiana tabacum
Nn1g03759 Nelumbo nucifera
Nn1g06910 Nelumbo nucifera
Nn2g11286 Nelumbo nucifera
Nn2g11287 Nelumbo nucifera
Oeu041272.1 Olea europaea
Peaxi162Scf00007g00157 Petunia axillaris
Peaxi162Scf00012g00273 Petunia axillaris
PGSC0003DMG400013754 Solanum tuberosum
PGSC0003DMG400026188 Solanum tuberosum
Phvul.005G111100 Phaseolus vulgaris
Phvul.011G107900 Phaseolus vulgaris
Potri.013G152300 Populus trichocarpa
Potri.019G125100 Populus trichocarpa
Prupe.3G223500 Prunus persica
Psat5g266920 Pisum sativum
Psat7g163320 Pisum sativum
QL08p034497 Quercus lobata
RcHm_v2.0_Chr2g0160641 Rosa chinensis
Rhsim02G0116500 Rhododendron simsii
Rhsim02G0116800 Rhododendron simsii
Rhsim06G0154900 Rhododendron simsii
Rhsim13G0163300 Rhododendron simsii
Sabra04G0016700 Salix brachista
Sabra13G0122400 Salix brachista
Sabra19G0123400 Salix brachista
Sabra19G0131200 Salix brachista
Sc12g0002510 Simmondsia chinensis
Sed0001937 Sechium edule
Sed0003235 Sechium edule
Sed0007405 Sechium edule
SGA_v2.0_scaffold70G23435 Striga asiatica
Solyc02g079800.1 Solanum lycopersicum
Solyc07g052990.1 Solanum lycopersicum
Solyc12g005690.1 Solanum lycopersicum
Sopen02g024570 Solanum pennellii
Sopen07g026540 Solanum pennellii
Sopen12g001620 Solanum pennellii
TAR271G0004 Trochodendron aralioides
Thecc.02G165500 Theobroma cacao
TPR.G18057 Trifolium pratense
TPR.G19047 Trifolium pratense
unitig_746.g26730 Utricularia gibba
unitig_899.g15247 Utricularia gibba
VMungo1080G0311 Vigna mungo
VMungo1127G0041 Vigna mungo

User provided reference genes

Program Settings