Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p10710 Brassica napus
Aa31LG8G13190 Aethionema arabicum
Ah.01g018070 Amaranthus hybridus
AL3G47080 Arabidopsis lyrata
Aqoxy5G01157 Aquilegia oxysepala
AT2G15320 Arabidopsis thaliana
ATR0724G003 Amborella trichopoda
Atru.chr5.2575 Acer truncatum
AUR62010277 Chenopodium quinoa
AUR62013256 Chenopodium quinoa
AUR62044359 Chenopodium quinoa
BcaB07g31791 Brassica carinata
BcaC04g23049 Brassica carinata
BolC9t54160H Brassica oleracea
BraA09t36716Z Brassica rapa
C09p12710 Brassica napus
CAN.G1231.13 Capsicum annuum
CANSAT25G0571 Cannabis sativa
CARHR105700 Cardamine hirsuta
Carub.0003s2921 Capsella rubella
Ca_11085_v3 Cicer arietinum L.
Cc02_g19160 Coffea canephora
CDE02G3472 Ceratophyllum demersum
Cfa004568 Carpinus fangiana
Ciclev10030023m.g Citrus clementina
CiPaw.05G010400 Carya illinoinensis
ClCG02G006250 Citrullus lanatus
COL.COLO4_32606 Corchorus olitorius
Cpa.g.sc106.82 Carica papaya
Cre12.g497450 Chlamydomonas reinhardtii
CsaV3_7G008270 Cucumis sativus L.
CSS0037176 Camellia sinensis var. sinensis
DCAR_021995 Daucus carota
Dinv15755 Davidia involucrata
Duzib052G1025 Durio zibethinus
Duzib132G0401 Durio zibethinus
EL10Ac9g22300 Beta vulgaris
Eucgr.H03228 Eucalyptus grandis
FAN15G2804 Fragaria x ananassa
FAN20G1091 Fragaria x ananassa
FAN24G2604 Fragaria x ananassa
FvH4_2g05350 Fragaria vesca
Glyma.09G087300 Glycine max
Glyma.10G263200 Glycine max
Glyma.20G127300 Glycine max
Gohir.A01G007800 Gossypium hirsutum
Gohir.A13G043300 Gossypium hirsutum
Gohir.D01G007950 Gossypium hirsutum
Gohir.D13G041800 Gossypium hirsutum
Gorai.002G009100 Gossypium raimondii
Gorai.013G046700 Gossypium raimondii
GSVIVG01003169001 Vitis vinifera
HanXRQChr03g0070241 Helianthus annuus
HanXRQChr09g0250571 Helianthus annuus
HanXRQChr10g0301541 Helianthus annuus
HanXRQChr10g0301551 Helianthus annuus
HanXRQChr10g0301561 Helianthus annuus
HanXRQChr16g0513181 Helianthus annuus
Haze_10159 Corylus avellana
Hma1.2p1_0474F.1_g160660 Hydrangea macrophylla
Hma1.2p1_0796F.1_g219100 Hydrangea macrophylla
Lalb_Chr21g0308401 Lupinus albus
Lj5g0008538 Lotus japonicus
Lj5P213T31 Lonicera japonica
Lj9P321T37 Lonicera japonica
Lsat_1_v5_gn_5_114620 Lactuca sativa
Lsat_1_v5_gn_9_111460 Lactuca sativa
Manes.07G069300 Manihot esculenta
MBI16_g31755_MAGBIO Magnolia biondii
MD05G1087700 Malus domestica
Medtr1g107500 Medicago truncatula
MELO3C018480.2 Cucumis melo
Migut.B00379 Erythranthe guttata
MSTRG.16718 Avicennia marina
Nitab4.5_0002815g0080 Nicotiana tabacum
Nitab4.5_0005392g0010 Nicotiana tabacum
Nn1g04720 Nelumbo nucifera
Nn5g30403 Nelumbo nucifera
Oeu013742.1 Olea europaea
Peaxi162Scf00016g02223 Petunia axillaris
PGR042G2178 Punica granatum
PGSC0003DMG400025867 Solanum tuberosum
Phvul.007G038700 Phaseolus vulgaris
Potri.001G301400 Populus trichocarpa
Potri.009G097100 Populus trichocarpa
Prupe.8G133500 Prunus persica
Psat6g219760 Pisum sativum
PSO170G4206 Papaver somniferum
PSO210G4027 Papaver somniferum
QL11p034059 Quercus lobata
RcHm_v2.0_Chr6g0255611 Rosa chinensis
Rhsim11G0160700 Rhododendron simsii
Sabra09G0074700 Salix brachista
Sabra16G0189500 Salix brachista
SalBow6G1098 Salvia bowleyana
SalBow7G2490 Salvia bowleyana
Sc08g0001480 Simmondsia chinensis
Sed0024536 Sechium edule
SGA_v2.0_scaffold32G13043 Striga asiatica
SGA_v2.0_scaffold5G02989 Striga asiatica
Solyc01g107670.2 Solanum lycopersicum
Sopen01g049850 Solanum pennellii
SpUn0368_0010 Schrenkiella parvula
TAR628G0324 Trochodendron aralioides
THA.LOC104807835 Tarenaya hassleriana
Thecc.02G106600 Theobroma cacao
Thhalv10022724m.g Eutrema salsugineum
TPR.G19060 Trifolium pratense
TPR.G27772 Trifolium pratense
TWI75G0581 Tripterygium wilfordii
VMungo0720G0738 Vigna mungo

User provided reference genes

Program Settings