Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p25500 Brassica napus
Aa31LG3G14910 Aethionema arabicum
Actinidia06960 Actinidia chinensis
Ah.06g194530 Amaranthus hybridus
AL6G23120 Arabidopsis lyrata
Aqoxy1G00362 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A9WCXI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FNNB0Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J3HRR4 Arachis hypogaea
AT5G12320 Arabidopsis thaliana
ATR0745G069 Amborella trichopoda
Atru.chr3.2764 Acer truncatum
Atru.chr4.1901 Acer truncatum
AUR62000186 Chenopodium quinoa
AUR62006537 Chenopodium quinoa
BolC9t59291H Brassica oleracea
BraA10t44614Z Brassica rapa
C09p64580 Brassica napus
CAN.G880.2 Capsicum annuum
CANSAT54G2482 Cannabis sativa
CARHR200790 Cardamine hirsuta
Carub.0006s1083 Capsella rubella
Ca_03986_v3 Cicer arietinum L.
Ca_12164_v3 Cicer arietinum L.
CBR_g48945 Chara braunii
Cc11_g02820 Coffea canephora
Cfa010648 Carpinus fangiana
Cfa010657 Carpinus fangiana
Ciclev10017489m.g Citrus clementina
CiPaw.13G151300 Carya illinoinensis
ClCG02G022890 Citrullus lanatus
COL.COLO4_35678 Corchorus olitorius
Cpa.g.sc482.3 Carica papaya
Cre12.g484500 Chlamydomonas reinhardtii
CsaV3_6G039020 Cucumis sativus L.
CSS0000717 Camellia sinensis var. sinensis
DCAR_023846 Daucus carota
Dinv36172 Davidia involucrata
Duzib150G1568 Durio zibethinus
Duzib168G0692 Durio zibethinus
ECA236G5047 Erigeron canadensis
EL10Ac4g10148 Beta vulgaris
Eucgr.B03730 Eucalyptus grandis
FAN19G1536 Fragaria x ananassa
FAN23G1846 Fragaria x ananassa
FAN26G3363 Fragaria x ananassa
FAN28G1393 Fragaria x ananassa
FvH4_1g25870 Fragaria vesca
Glyma.08G150200 Glycine max
Gohir.A07G120000 Gossypium hirsutum
Gohir.D07G124200 Gossypium hirsutum
Gorai.001G134000 Gossypium raimondii
GSVIVG01037268001 Vitis vinifera
HanXRQChr17g0535301 Helianthus annuus
Haze_03594 Corylus avellana
Haze_23224 Corylus avellana
Hma1.2p1_0842F.1_g227150 Hydrangea macrophylla
Hma1.2p1_0842F.1_g227160 Hydrangea macrophylla
HPP92_013978 Vanilla planifolia
Hund07439 Selenicereus undatus
Lalb_Chr18g0054451 Lupinus albus
Lj1A285T18 Lonicera japonica
Lj1A285T19 Lonicera japonica
Lj6g0012120 Lotus japonicus
Lsat_1_v5_gn_2_34061 Lactuca sativa
Manes.01G179700 Manihot esculenta
Manes.02G140201 Manihot esculenta
Mapoly0026s0092 Marchantia polymorpha
MBI13_g27793_MAGBIO Magnolia biondii
MCO14G389 Micromonas commoda
MD03G1167000 Malus domestica
MD11G1186200 Malus domestica
Medtr3g088410 Medicago truncatula
MELO3C014563.2 Cucumis melo
Migut.O00557 Erythranthe guttata
Nitab4.5_0000129g0400 Nicotiana tabacum
Nitab4.5_0003882g0010 Nicotiana tabacum
Nn7g36693 Nelumbo nucifera
Peaxi162Scf00329g00929 Petunia axillaris
PGR102G1924 Punica granatum
PGSC0003DMG400031376 Solanum tuberosum
Phvul.006G021300 Phaseolus vulgaris
Potri.001G276100 Populus trichocarpa
Potri.009G070700 Populus trichocarpa
Pp3c2_27120 Physcomitrium patens
PRCOL_00000160 Prasinoderma coloniale
Prupe.4G267400 Prunus persica
Psat1g051560 Pisum sativum
QL01p017309 Quercus lobata
RcHm_v2.0_Chr3g0485011 Rosa chinensis
Rhsim13G0210700 Rhododendron simsii
Sabra09G0053500 Salix brachista
SalBow5G2023 Salvia bowleyana
SalBow5G2895 Salvia bowleyana
Sc06g0004670 Simmondsia chinensis
Sed0028076 Sechium edule
SGA_v2.0_scaffold43G16444 Striga asiatica
SMO164G0043 Selaginella moellendorffii
Solyc04g008580.3 Solanum lycopersicum
Sopen04g003740 Solanum pennellii
Sp6g31320 Schrenkiella parvula
TAR369G0480 Trochodendron aralioides
TAR623G0360 Trochodendron aralioides
THA.LOC104799122 Tarenaya hassleriana
Thecc.09G249300 Theobroma cacao
Thhalv10014957m.g Eutrema salsugineum
TPR.G13466 Trifolium pratense
TWI23G1223 Tripterygium wilfordii
unitig_749.g14354 Utricularia gibba
VMungo0540G2405 Vigna mungo
Zm00001eb329760 Zea mays

User provided reference genes

Program Settings