Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p43340 Brassica napus
Aa31LG5G14590 Aethionema arabicum
Actinidia29223 Actinidia chinensis
Ah.16g107010 Amaranthus hybridus
AL3G13930 Arabidopsis lyrata
Aqoxy2G02097 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea
AT3G04020 Arabidopsis thaliana
ATR0559G284 Amborella trichopoda
Atru.chr12.462 Acer truncatum
Atru.chr12.484 Acer truncatum
AUR62038352 Chenopodium quinoa
AUR62041861 Chenopodium quinoa
AUR62041862 Chenopodium quinoa
BcaC05g30543 Brassica carinata
BolC5t34957H Brassica oleracea
BraA05t23073Z Brassica rapa
C05p63040 Brassica napus
CAN.G1401.1 Capsicum annuum
CANSAT56G3368 Cannabis sativa
CARHR078150 Cardamine hirsuta
Carub.0003s0327 Capsella rubella
Ca_07254_v3 Cicer arietinum L.
Cc02_g07990 Coffea canephora
CDE09G1315 Ceratophyllum demersum
Cfa001492 Carpinus fangiana
Ciclev10032197m.g Citrus clementina
CiPaw.01G285300 Carya illinoinensis
ClCG09G019950 Citrullus lanatus
COL.COLO4_14997 Corchorus olitorius
Cpa.g.sc1.397 Carica papaya
CsaV3_5G026510 Cucumis sativus L.
CSS0002221 Camellia sinensis var. sinensis
CSS0005502 Camellia sinensis var. sinensis
CSS0010171 Camellia sinensis var. sinensis
CSS0027543 Camellia sinensis var. sinensis
DCAR_027635 Daucus carota
Dinv26003 Davidia involucrata
Dinv31448 Davidia involucrata
Duzib106G1934 Durio zibethinus
ECA238G4577 Erigeron canadensis
EL10Ac2g03388 Beta vulgaris
Eucgr.J00020 Eucalyptus grandis
FAN01G1261 Fragaria x ananassa
FAN01G1850 Fragaria x ananassa
FAN03G0232 Fragaria x ananassa
FAN06G2040 Fragaria x ananassa
FAN06G2061 Fragaria x ananassa
FAN10G3057 Fragaria x ananassa
FvH4_7g22120 Fragaria vesca
Glyma.02G092900 Glycine max
Glyma.18G289500 Glycine max
Gohir.A10G217300 Gossypium hirsutum
Gohir.D10G226000 Gossypium hirsutum
Gorai.011G257200 Gossypium raimondii
GSVIVG01016535001 Vitis vinifera
HanXRQChr14g0458151 Helianthus annuus
Haze_17049 Corylus avellana
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla
HPP92_001682 Vanilla planifolia
Hund20032 Selenicereus undatus
Lalb_Chr10g0091721 Lupinus albus
Lj1g0011729 Lotus japonicus
Lj4C909G7 Lonicera japonica
Lsat_1_v5_gn_2_119701 Lactuca sativa
Manes.07G114900 Manihot esculenta
Mapoly0002s0030 Marchantia polymorpha
MBI05_g22899_MAGBIO Magnolia biondii
MD07G1196400 Malus domestica
Medtr7g024560 Medicago truncatula
MELO3C021650.2 Cucumis melo
Migut.F01500 Erythranthe guttata
MSTRG.8246 Avicennia marina
Nitab4.5_0000065g0080 Nicotiana tabacum
Nitab4.5_0000931g0010 Nicotiana tabacum
Nn2g10391 Nelumbo nucifera
Os03g0276600 Oryza sativa ssp. japonica
Peaxi162Scf00658g00728 Petunia axillaris
PGR044G0021 Punica granatum
Phvul.008G012700 Phaseolus vulgaris
Potri.010G205900 Populus trichocarpa
Pp3c12_11030 Physcomitrium patens
Prupe.2G233400 Prunus persica
Psat3g181320 Pisum sativum
PSO151G0201 Papaver somniferum
PSO339G3352 Papaver somniferum
QL08p059192 Quercus lobata
RcHm_v2.0_Chr1g0366511 Rosa chinensis
Rhsim09G0165500 Rhododendron simsii
Sabra10G0159100 Salix brachista
SalBow6G2062 Salvia bowleyana
Sc09g0007080 Simmondsia chinensis
Sed0006263 Sechium edule
SEGI_31981 Sequoiadendron giganteum
SGA_v2.0_scaffold86G26943 Striga asiatica
SHI07863 Sapria himalayana
Solyc06g043060.1 Solanum lycopersicum
Solyc06g043070.4 Solanum lycopersicum
Sopen06g013560 Solanum pennellii
Sp3g03000 Schrenkiella parvula
THA.LOC104799346 Tarenaya hassleriana
Thecc.10G044100 Theobroma cacao
Thhalv10021212m.g Eutrema salsugineum
TPR.G15525 Trifolium pratense
TWI15G0021 Tripterygium wilfordii
unitig_736.g22315 Utricularia gibba
vmacro10240 Vaccinium macrocarpon
VMungo1383G1564 Vigna mungo
Zm00001eb012480 Zea mays

User provided reference genes

Program Settings