Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p16070 Brassica napus
A09p58330 Brassica napus
Aa31LG7G15200 Aethionema arabicum
Aa31LG7G15350 Aethionema arabicum
Actinidia02247 Actinidia chinensis
Ah.01g018800 Amaranthus hybridus
AL4G10430 Arabidopsis lyrata
Aqoxy2G03368 Aquilegia oxysepala
AT2G21290 Arabidopsis thaliana
ATR0149G014 Amborella trichopoda
Atru.chr5.3145 Acer truncatum
AUR62010386 Chenopodium quinoa
AUR62016832 Chenopodium quinoa
BcaB08g34980 Brassica carinata
BcaC02g08801 Brassica carinata
BcaC07g41158 Brassica carinata
BolC4t26651H Brassica oleracea
BolC8t51729H Brassica oleracea
BraA04t17247Z Brassica rapa
BraA09t41224Z Brassica rapa
C04p50530 Brassica napus
C08p41660 Brassica napus
CAN.G170.101 Capsicum annuum
CANSAT11G0395 Cannabis sativa
CARHR112160 Cardamine hirsuta
Carub.0004s0033 Capsella rubella
Ca_15331_v3 Cicer arietinum L.
Cc02_g16900 Coffea canephora
CDE04G2580 Ceratophyllum demersum
Cfa005113 Carpinus fangiana
Ciclev10029699m.g Citrus clementina
CiPaw.05G073400 Carya illinoinensis
ClCG02G004560 Citrullus lanatus
COL.COLO4_26047 Corchorus olitorius
Cpa.g.sc150.16 Carica papaya
CsaV3_7G000400 Cucumis sativus L.
CSS0017994 Camellia sinensis var. sinensis
CSS0018566 Camellia sinensis var. sinensis
DCAR_003685 Daucus carota
Duzib052G0169 Durio zibethinus
Duzib132G0527 Durio zibethinus
Duzib248G1605 Durio zibethinus
ECA234G2991 Erigeron canadensis
EL10Ac9g21635 Beta vulgaris
FAN15G3517 Fragaria x ananassa
FAN20G0703 Fragaria x ananassa
FAN24G2677 Fragaria x ananassa
FAN27G3517 Fragaria x ananassa
FvH4_2g10470 Fragaria vesca
Glyma.04G007900 Glycine max
Glyma.06G007700 Glycine max
Gohir.A03G200700 Gossypium hirsutum
Gohir.A13G090900 Gossypium hirsutum
Gohir.D02G222000 Gossypium hirsutum
Gohir.D13G096700 Gossypium hirsutum
Gorai.002G149200 Gossypium raimondii
Gorai.005G250000 Gossypium raimondii
GSVIVG01024170001 Vitis vinifera
HanXRQChr10g0294181 Helianthus annuus
Haze_02238 Corylus avellana
Haze_08383 Corylus avellana
HPP92_008881 Vanilla planifolia
Lalb_Chr23g0265121 Lupinus albus
Lalb_Chr23g0265141 Lupinus albus
Lj1g0005652 Lotus japonicus
Lsat_1_v5_gn_4_67341 Lactuca sativa
Manes.04G083200 Manihot esculenta
Manes.11G081700 Manihot esculenta
Mapoly0090s0033 Marchantia polymorpha
MBI05_g16268_MAGBIO Magnolia biondii
MD05G1055600 Malus domestica
MD10G1062900 Malus domestica
Medtr3g117570 Medicago truncatula
MELO3C013419.2 Cucumis melo
Migut.B00173 Erythranthe guttata
Nitab4.5_0005266g0060 Nicotiana tabacum
Nitab4.5_0005932g0010 Nicotiana tabacum
Nn5g29239 Nelumbo nucifera
Os09g0528100 Oryza sativa ssp. japonica
Peaxi162Scf00016g00015 Petunia axillaris
PGR142G3962 Punica granatum
Phvul.009G002700 Phaseolus vulgaris
Potri.004G163100 Populus trichocarpa
Potri.009G124700 Populus trichocarpa
Pp3c2_9610 Physcomitrium patens
Prupe.8G083700 Prunus persica
Psat5g003840 Pisum sativum
PSO541G1924 Papaver somniferum
PSO675G0190 Papaver somniferum
QL11p046458 Quercus lobata
RcHm_v2.0_Chr6g0267951 Rosa chinensis
Rhsim05G0068200 Rhododendron simsii
Sabra04G0109400 Salix brachista
Sabra09G0095700 Salix brachista
SalBow6G3736 Salvia bowleyana
Sc08g0000910 Simmondsia chinensis
Sed0017056 Sechium edule
SHI05613 Sapria himalayana
Solyc01g110400.2 Solanum lycopersicum
Sopen01g052550 Solanum pennellii
Sp4g00480 Schrenkiella parvula
TAR381G0296 Trochodendron aralioides
THA.LOC104824791 Tarenaya hassleriana
Thecc.02G074900 Theobroma cacao
Thhalv10000391m.g Eutrema salsugineum
TPR.G32169 Trifolium pratense
TWI75G0424 Tripterygium wilfordii
TWI79G1445 Tripterygium wilfordii
unitig_60.g25867 Utricularia gibba
vmacro17421 Vaccinium macrocarpon
Zm00001eb103340 Zea mays

User provided reference genes

Program Settings