Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p00930 Brassica napus
Aa31LG1G28270 Aethionema arabicum
Actinidia33027 Actinidia chinensis
Ah.11g050690 Amaranthus hybridus
Aqoxy5G04392 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.KLKB5C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XK7RJX Arachis hypogaea
AT2G46910 Arabidopsis thaliana
ATR0579G047 Amborella trichopoda
Atru.chr5.816 Acer truncatum
AUR62008050 Chenopodium quinoa
AUR62028625 Chenopodium quinoa
BcaC02g12634 Brassica carinata
BraA05t19094Z Brassica rapa
CAN.G21.48 Capsicum annuum
CANSAT01G1971 Cannabis sativa
CARHR142260 Cardamine hirsuta
Carub.0004s2963 Capsella rubella
Ca_20970_v3 Cicer arietinum L.
Cc02_g30330 Coffea canephora
CDE02G4652 Ceratophyllum demersum
Ciclev10021604m.g Citrus clementina
CiPaw.01G090900 Carya illinoinensis
ClCG07G014660 Citrullus lanatus
COL.COLO4_23084 Corchorus olitorius
Cpa.g.sc57.60 Carica papaya
Cre01.g039550 Chlamydomonas reinhardtii
CsaV3_3G030490 Cucumis sativus L.
Dinv25395 Davidia involucrata
Dinv32665 Davidia involucrata
Duzib133G0914 Durio zibethinus
ECA234G3018 Erigeron canadensis
EL10Ac5g10570 Beta vulgaris
Eucgr.E00013 Eucalyptus grandis
FAN02G0509 Fragaria x ananassa
FAN02G1034 Fragaria x ananassa
FAN05G3242 Fragaria x ananassa
FAN05G3936 Fragaria x ananassa
FAN09G2218 Fragaria x ananassa
FAN14G0283 Fragaria x ananassa
FAN14G1589 Fragaria x ananassa
FvH4_6g35960 Fragaria vesca
FvH4_6g36990 Fragaria vesca
Glyma.07G002100 Glycine max
Glyma.08G224600 Glycine max
Glyma.14G134000 Glycine max
Gohir.A11G103000 Gossypium hirsutum
Gohir.D11G107500 Gossypium hirsutum
Gorai.007G115100 Gossypium raimondii
GSVIVG01027487001 Vitis vinifera
HanXRQChr16g0524441 Helianthus annuus
Haze_16258 Corylus avellana
Hma1.2p1_0074F.1_g038925 Hydrangea macrophylla
Hma1.2p1_0074F.1_g038930 Hydrangea macrophylla
HPP92_007409 Vanilla planifolia
Hund02816 Selenicereus undatus
Lalb_Chr04g0264851 Lupinus albus
Lj3g0016159 Lotus japonicus
Lj9A610T61 Lonicera japonica
Lsat_1_v5_gn_4_31280 Lactuca sativa
Manes.01G237100 Manihot esculenta
Mapoly0069s0014 Marchantia polymorpha
MBI12_g33188_MAGBIO Magnolia biondii
MCO07G119 Micromonas commoda
MD17G1162500 Malus domestica
Medtr4g005390 Medicago truncatula
MELO3C026712.2 Cucumis melo
Migut.N02127 Erythranthe guttata
MSTRG.12208 Avicennia marina
Nitab4.5_0006202g0020 Nicotiana tabacum
Nn1g00501 Nelumbo nucifera
Oeu050289.1 Olea europaea
Os10g0509200 Oryza sativa ssp. japonica
Peaxi162Scf00822g00313 Petunia axillaris
PGR042G2951 Punica granatum
PGSC0003DMG400029047 Solanum tuberosum
Phvul.010G164100 Phaseolus vulgaris
Potri.002G183700 Populus trichocarpa
Pp3c11_15290 Physcomitrium patens
Pp3c2_10460 Physcomitrium patens
PRCOL_00002778 Prasinoderma coloniale
Prupe.3G022800 Prunus persica
Psat7g265240 Pisum sativum
Psat7g265360 Pisum sativum
Psat7g265400 Pisum sativum
PSO063G7482 Papaver somniferum
PSO782G5442 Papaver somniferum
QL05p083819 Quercus lobata
QL05p084392 Quercus lobata
QL05p084699 Quercus lobata
RcHm_v2.0_Chr2g0149531 Rosa chinensis
Rhsim04G0175900 Rhododendron simsii
Sabra02G0131900 Salix brachista
Sc05g0001590 Simmondsia chinensis
Sed0017612 Sechium edule
SGA_v2.0_scaffold104G30244 Striga asiatica
SGA_v2.0_scaffold159G37569 Striga asiatica
SMO232G0083 Selaginella moellendorffii
Solyc08g068590.4 Solanum lycopersicum
Sopen08g022350 Solanum pennellii
Sp4g28930 Schrenkiella parvula
TAR629G1569 Trochodendron aralioides
THA.LOC104802109 Tarenaya hassleriana
Thecc.01G329100 Theobroma cacao
Thhalv10001577m.g Eutrema salsugineum
TPR.G38811 Trifolium pratense
TWI59G0863 Tripterygium wilfordii
unitig_0.g1006 Utricularia gibba
vmacro08515 Vaccinium macrocarpon
Zm00001eb094490 Zea mays
Zm00001eb220590 Zea mays

User provided reference genes

Program Settings