Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p22930 Brassica napus
A04p31140 Brassica napus
A05p01890 Brassica napus
Aa31LG3G1380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.712 Anthoceros agrestis
AL4G38650 Arabidopsis lyrata
Aqoxy4G03269 Aquilegia oxysepala
AT2G40765 Arabidopsis thaliana
ATR1127G135 Amborella trichopoda
Atru.chr12.199 Acer truncatum
BcaB01g03516 Brassica carinata
BcaC01g00581 Brassica carinata
BcaC02g12732 Brassica carinata
BolC3t15101H Brassica oleracea
BolC4t21869H Brassica oleracea
BolC4t28353H Brassica oleracea
BraA03t11516Z Brassica rapa
BraA04t18569Z Brassica rapa
C01p18970 Brassica napus
C01p26040 Brassica napus
C04p02230 Brassica napus
C04p16380 Brassica napus
C04p68540 Brassica napus
CAN.G1229.12 Capsicum annuum
CANSAT56G4069 Cannabis sativa
CARHR135860 Cardamine hirsuta
Carub.0004s2306 Capsella rubella
CBR_g11002 Chara braunii
Cc02_g05250 Coffea canephora
Cfa001199 Carpinus fangiana
Cfa011840 Carpinus fangiana
Ciclev10033060m.g Citrus clementina
CiPaw.09G151000 Carya illinoinensis
CiPaw.13G063000 Carya illinoinensis
CiPaw.14G049800 Carya illinoinensis
ClCG11G005640 Citrullus lanatus
COL.COLO4_19468 Corchorus olitorius
CsaV3_5G011100 Cucumis sativus L.
CsaV3_6G002350 Cucumis sativus L.
CSS0015321 Camellia sinensis var. sinensis
DCAR_014662 Daucus carota
DCAR_018042 Daucus carota
Duzib128G0262 Durio zibethinus
EL10Ac2g02666 Beta vulgaris
FAN01G0895 Fragaria x ananassa
FAN03G2745 Fragaria x ananassa
FAN06G1351 Fragaria x ananassa
FAN10G2835 Fragaria x ananassa
FAN11G0923 Fragaria x ananassa
FAN21G2234 Fragaria x ananassa
FvH4_7g26050 Fragaria vesca
Glyma.04G223400 Glycine max
Glyma.06G141900 Glycine max
Gohir.A06G180100 Gossypium hirsutum
Gohir.A13G007800 Gossypium hirsutum
Gohir.D06G187000 Gossypium hirsutum
Gohir.D13G008000 Gossypium hirsutum
Gorai.010G219300 Gossypium raimondii
Gorai.013G008400 Gossypium raimondii
GSVIVG01032659001 Vitis vinifera
HanXRQChr02g0048061 Helianthus annuus
HanXRQChr10g0312991 Helianthus annuus
Hma1.2p1_0264F.1_g105975 Hydrangea macrophylla
Hma1.2p1_1805F.1_g303200 Hydrangea macrophylla
HPP92_000774 Vanilla planifolia
HPP92_026799 Vanilla planifolia
Hund13439 Selenicereus undatus
Hund15797 Selenicereus undatus
Lalb_Chr08g0239241 Lupinus albus
Lalb_Chr11g0067731 Lupinus albus
Lalb_Chr23g0272151 Lupinus albus
Lj1A968T57 Lonicera japonica
Lj1g0003388 Lotus japonicus
Lsat_1_v5_gn_6_11060 Lactuca sativa
Manes.07G142200 Manihot esculenta
Manes.10G002800 Manihot esculenta
MBI15_g39383_MAGBIO Magnolia biondii
MD01G1169000 Malus domestica
MD03G1050700 Malus domestica
MD07G1234900 Malus domestica
Medtr3g093810 Medicago truncatula
MELO3C020013.2 Cucumis melo
Migut.F00570 Erythranthe guttata
MSTRG.27254 Avicennia marina
Nitab4.5_0000171g0210 Nicotiana tabacum
Nitab4.5_0000375g0220 Nicotiana tabacum
Nitab4.5_0011372g0020 Nicotiana tabacum
Nitab4.5_0012297g0020 Nicotiana tabacum
Nn2g10275 Nelumbo nucifera
Nn5g26831 Nelumbo nucifera
Oeu006064.1 Olea europaea
Os07g0680300 Oryza sativa ssp. japonica
Peaxi162Scf00073g02342 Petunia axillaris
Peaxi162Scf00184g00003 Petunia axillaris
PGSC0003DMG400020601 Solanum tuberosum
Phvul.009G043000 Phaseolus vulgaris
Potri.019G059500 Populus trichocarpa
Pp3c1_22660 Physcomitrium patens
Prupe.2G265200 Prunus persica
Prupe.6G040200 Prunus persica
RcHm_v2.0_Chr1g0372461 Rosa chinensis
RcHm_v2.0_Chr7g0235281 Rosa chinensis
RcHm_v2.0_Chr7g0235311 Rosa chinensis
Sc11g0006040 Simmondsia chinensis
Sed0001421 Sechium edule
Sed0014987 Sechium edule
Solyc03g095730.4 Solanum lycopersicum
Sopen07g008940 Solanum pennellii
Sp4g23080 Schrenkiella parvula
TAR369G0939 Trochodendron aralioides
Thecc.10G184500 Theobroma cacao
Thhalv10017507m.g Eutrema salsugineum

User provided reference genes

Program Settings