Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p16220 Brassica napus
Aa31LG10G9070 Aethionema arabicum
Aa31LG7G10860 Aethionema arabicum
Actinidia18342 Actinidia chinensis
Actinidia25565 Actinidia chinensis
Ah.02g114850 Amaranthus hybridus
AL6G46780 Arabidopsis lyrata
AL7G28270 Arabidopsis lyrata
Aqoxy5G03328 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea
AT4G24930 Arabidopsis thaliana
ATR0405G001 Amborella trichopoda
ATR0790G002 Amborella trichopoda
Atru.chr6.1807 Acer truncatum
AUR62029602 Chenopodium quinoa
AUR62034838 Chenopodium quinoa
BcaNung06011 Brassica carinata
BolC1t01950H Brassica oleracea
BraA01t01558Z Brassica rapa
C01p20210 Brassica napus
CAN.G1611.7 Capsicum annuum
CANSAT80G2203 Cannabis sativa
CARHR232330 Cardamine hirsuta
Carub.0007s1613 Capsella rubella
Ca_16052_v3 Cicer arietinum L.
Cc04_g09720 Coffea canephora
CDE02G1164 Ceratophyllum demersum
Cfa018785 Carpinus fangiana
Ciclev10032623m.g Citrus clementina
CiPaw.12G043900 Carya illinoinensis
ClCG03G003830 Citrullus lanatus
COL.COLO4_28141 Corchorus olitorius
Cpa.g.sc13.101 Carica papaya
Cre17.g714900 Chlamydomonas reinhardtii
CsaV3_1G009730 Cucumis sativus L.
CSS0028892 Camellia sinensis var. sinensis
CSS0028949 Camellia sinensis var. sinensis
DCAR_007496 Daucus carota
Dinv23157 Davidia involucrata
Duzib205G1497 Durio zibethinus
EL10Ac5g11401 Beta vulgaris
Eucgr.B00101 Eucalyptus grandis
FAN04G0070 Fragaria x ananassa
FAN04G1902 Fragaria x ananassa
FAN08G1896 Fragaria x ananassa
FAN13G1038 Fragaria x ananassa
FAN13G2062 Fragaria x ananassa
FAN18G1815 Fragaria x ananassa
FAN18G3505 Fragaria x ananassa
FvH4_5g08420 Fragaria vesca
Glyma.04G196500 Glycine max
Glyma.06G169300 Glycine max
Gohir.A11G036350 Gossypium hirsutum
Gohir.D11G039800 Gossypium hirsutum
Gorai.007G042800 Gossypium raimondii
GSVIVG01008566001 Vitis vinifera
HanXRQChr02g0034681 Helianthus annuus
Haze_07151 Corylus avellana
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla
HPP92_023120 Vanilla planifolia
Hund02448 Selenicereus undatus
Lalb_Chr11g0069511 Lupinus albus
Lj1g0010129 Lotus japonicus
Lj5A95G76 Lonicera japonica
Lsat_1_v5_gn_1_33120 Lactuca sativa
Manes.14G050500 Manihot esculenta
MBI11_g41395_MAGBIO Magnolia biondii
MCO03G440 Micromonas commoda
MD06G1140800 Malus domestica
Medtr3g099140 Medicago truncatula
MELO3C002367.2 Cucumis melo
Migut.I00540 Erythranthe guttata
MSTRG.11273 Avicennia marina
Nitab4.5_0000624g0110 Nicotiana tabacum
Nitab4.5_0001311g0160 Nicotiana tabacum
Nn4g22293 Nelumbo nucifera
Oeu004998.1 Olea europaea
Os01g0102300 Oryza sativa ssp. japonica
Peaxi162Scf00089g00121 Petunia axillaris
PGR083G2674 Punica granatum
PGSC0003DMG400015264 Solanum tuberosum
Phvul.009G165800 Phaseolus vulgaris
Potri.015G097700 Populus trichocarpa
Pp3c6_23090 Physcomitrium patens
Prupe.5G150000 Prunus persica
Psat5g051920 Pisum sativum
PSO017G0512 Papaver somniferum
QL10p002688 Quercus lobata
RcHm_v2.0_Chr7g0190021 Rosa chinensis
Rhsim08G0191000 Rhododendron simsii
Sabra12G0072200 Salix brachista
Sabra15G0118300 Salix brachista
SalBow5G3672 Salvia bowleyana
Sc04g0000560 Simmondsia chinensis
Sed0002696 Sechium edule
SEGI_00544 Sequoiadendron giganteum
SGA_v2.0_scaffold258G45802 Striga asiatica
SMO356G0600 Selaginella moellendorffii
Solyc03g019660.4 Solanum lycopersicum
Sopen03g029960 Solanum pennellii
Sp7g22910 Schrenkiella parvula
TAR622G0416 Trochodendron aralioides
THA.LOC104811583 Tarenaya hassleriana
Thecc.03G130400 Theobroma cacao
Thhalv10026135m.g Eutrema salsugineum
TPR.G14207 Trifolium pratense
TWI39G0929 Tripterygium wilfordii
unitig_8.g3030 Utricularia gibba
vmacro19121 Vaccinium macrocarpon
VMungo1309G2111 Vigna mungo
Zm00001eb334110 Zea mays

User provided reference genes

Program Settings