Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p40690 Brassica napus
Aa31LG5G18060 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis
Actinidia23803 Actinidia chinensis
Ah.11g050810 Amaranthus hybridus
Aqoxy5G04050 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea
AT3G07525 Arabidopsis thaliana
ATR0752G208 Amborella trichopoda
Atru.chr6.3529 Acer truncatum
AUR62008068 Chenopodium quinoa
AUR62028645 Chenopodium quinoa
BcaC05g29544 Brassica carinata
BolC4t25047H Brassica oleracea
BolC5t34634H Brassica oleracea
BraA05t22800Z Brassica rapa
C04p34930 Brassica napus
C05p59800 Brassica napus
CAN.G50.11 Capsicum annuum
CANSAT01G1474 Cannabis sativa
CARHR082180 Cardamine hirsuta
Carub.0003s0707 Capsella rubella
Ca_23159_v3 Cicer arietinum L.
Cc01_g15870 Coffea canephora
CDE05G1497 Ceratophyllum demersum
CDE05G2169 Ceratophyllum demersum
Cfa017735 Carpinus fangiana
Ciclev10016325m.g Citrus clementina
CiPaw.14G038400 Carya illinoinensis
ClCG09G008370 Citrullus lanatus
COL.COLO4_34270 Corchorus olitorius
Cpa.g.sc8.40 Carica papaya
CsaV3_7G026720 Cucumis sativus L.
CSS0005940 Camellia sinensis var. sinensis
DCAR_018609 Daucus carota
Dinv28792 Davidia involucrata
Duzib133G1446 Durio zibethinus
EL10Ac5g10586 Beta vulgaris
EL10Ac5g10588 Beta vulgaris
Eucgr.K02360 Eucalyptus grandis
FAN15G3611 Fragaria x ananassa
FAN24G0137 Fragaria x ananassa
FvH4_2g17490 Fragaria vesca
Glyma.03G097000 Glycine max
Glyma.07G124300 Glycine max
Gohir.A07G195600 Gossypium hirsutum
Gohir.D07G202200 Gossypium hirsutum
Gorai.001G227200 Gossypium raimondii
GSVIVG01001529001 Vitis vinifera
HanXRQChr03g0082541 Helianthus annuus
HanXRQChr08g0231791 Helianthus annuus
Haze_03371 Corylus avellana
Haze_03375 Corylus avellana
Haze_03378 Corylus avellana
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla
HPP92_001291 Vanilla planifolia
Hund02806 Selenicereus undatus
Lalb_Chr07g0194661 Lupinus albus
Lj2A1111T23 Lonicera japonica
LjContig00389g0002281 Lotus japonicus
Lsat_1_v5_gn_9_16901 Lactuca sativa
Manes.13G056200 Manihot esculenta
Mapoly0002s0314 Marchantia polymorpha
MBI10_g35388_MAGBIO Magnolia biondii
MD05G1153700 Malus domestica
MD10G1148000 Malus domestica
Medtr8g010140 Medicago truncatula
MELO3C021125.2 Cucumis melo
Migut.D00774 Erythranthe guttata
MSTRG.18505 Avicennia marina
Nitab4.5_0000038g0350 Nicotiana tabacum
Nitab4.5_0010469g0020 Nicotiana tabacum
Nn7g37436 Nelumbo nucifera
Nn7g37443 Nelumbo nucifera
Oeu013523.1 Olea europaea
Os04g0497350 Oryza sativa ssp. japonica
Os12g0506800 Oryza sativa ssp. japonica
Peaxi162Scf02239g00022 Petunia axillaris
PGR044G1116 Punica granatum
PGSC0003DMG400021909 Solanum tuberosum
Phvul.010G036300 Phaseolus vulgaris
Pp3c26_2050 Physcomitrium patens
Prupe.8G187100 Prunus persica
Psat4g208280 Pisum sativum
PSO675G4719 Papaver somniferum
PSO732G0401 Papaver somniferum
QL05p089159 Quercus lobata
RcHm_v2.0_Chr6g0282211 Rosa chinensis
Rhsim01G0247600 Rhododendron simsii
Sabra14G0134200 Salix brachista
SalBow3G4154 Salvia bowleyana
Sc24g0003360 Simmondsia chinensis
Sed0011312 Sechium edule
SGA_v2.0_scaffold29G12307 Striga asiatica
SHI30551 Sapria himalayana
SMO141G0021 Selaginella moellendorffii
Solyc09g047840.3 Solanum lycopersicum
Sopen09g015950 Solanum pennellii
Sp3g06430 Schrenkiella parvula
TAR362G0557 Trochodendron aralioides
THA.LOC104819012 Tarenaya hassleriana
Thecc.01G207600 Theobroma cacao
Thhalv10022158m.g Eutrema salsugineum
TPR.G17379 Trifolium pratense
TWI18G1453 Tripterygium wilfordii
TWI36G0064 Tripterygium wilfordii
unitig_60.g25572 Utricularia gibba
vmacro14688 Vaccinium macrocarpon
VMungo0331G1777 Vigna mungo
Zm00001eb425740 Zea mays

User provided reference genes

Program Settings