Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia08354 Actinidia chinensis
Actinidia19426 Actinidia chinensis
Actinidia23253 Actinidia chinensis
Actinidia25349 Actinidia chinensis
Ah.10g038560 Amaranthus hybridus
arahy.Tifrunner.gnm1.ann1.K9M8RY Arachis hypogaea
Atru.chr11.2527 Acer truncatum
AUR62009423 Chenopodium quinoa
AUR62023101 Chenopodium quinoa
CAN.G909.14 Capsicum annuum
CANSAT80G2748 Cannabis sativa
Ca_26440_v3 Cicer arietinum L.
Ca_27474_v3 Cicer arietinum L.
Cc02_g28960 Coffea canephora
Cfa010821 Carpinus fangiana
Ciclev10032181m.g Citrus clementina
CiPaw.08G144600 Carya illinoinensis
CiPaw.13G008200 Carya illinoinensis
CiPaw.14G003600 Carya illinoinensis
CiPaw.15G135600 Carya illinoinensis
ClCG09G004450 Citrullus lanatus
ClCG10G012150 Citrullus lanatus
COL.COLO4_12331 Corchorus olitorius
Cpa.g.c33908 Carica papaya
Cpa.g.sc125.54 Carica papaya
CsaV3_3G031910 Cucumis sativus L.
CsaV3_7G030690 Cucumis sativus L.
Dinv07428 Davidia involucrata
Duzib133G0385 Durio zibethinus
Duzib138G1369 Durio zibethinus
Duzib268G1698 Durio zibethinus
ECA248G3518 Erigeron canadensis
Eucgr.G03285 Eucalyptus grandis
FAN03G1693 Fragaria x ananassa
FAN06G2427 Fragaria x ananassa
FAN10G2826 Fragaria x ananassa
FvH4_7g01730 Fragaria vesca
Glyma.04G142400 Glycine max
Glyma.11G159021 Glycine max
Gohir.A08G141600 Gossypium hirsutum
Gohir.A12G100450 Gossypium hirsutum
Gohir.D08G162700 Gossypium hirsutum
Gorai.004G169100 Gossypium raimondii
HanXRQChr01g0007891 Helianthus annuus
Hma1.2p1_0269F.1_g107760 Hydrangea macrophylla
Lalb_Chr01g0000491 Lupinus albus
Lalb_Chr25g0282601 Lupinus albus
Lj3g0012595 Lotus japonicus
Lj3g0020735 Lotus japonicus
Lsat_1_v5_gn_1_104720 Lactuca sativa
Lsat_1_v5_gn_1_104740 Lactuca sativa
Manes.07G011500 Manihot esculenta
Manes.10G135500 Manihot esculenta
MD02G1301300 Malus domestica
MD07G1022600 Malus domestica
MD07G1022700 Malus domestica
Medtr0003s0580 Medicago truncatula
Medtr3g028060 Medicago truncatula
Medtr3g034370 Medicago truncatula
Medtr3g034410 Medicago truncatula
Medtr3g034540 Medicago truncatula
MELO3C023587.2 Cucumis melo
MELO3C024000.2 Cucumis melo
Migut.B01258 Erythranthe guttata
Migut.B01259 Erythranthe guttata
MSTRG.17005 Avicennia marina
MSTRG.20556 Avicennia marina
MSTRG.5044 Avicennia marina
Nitab4.5_0001244g0020 Nicotiana tabacum
Nitab4.5_0004222g0010 Nicotiana tabacum
Nn7g36341 Nelumbo nucifera
Oeu014598.1 Olea europaea
Oeu049473.1 Olea europaea
Peaxi162Scf01108g00310 Petunia axillaris
PGSC0003DMG400041994 Solanum tuberosum
PGSC0003DMG402006771 Solanum tuberosum
Phvul.005G036000 Phaseolus vulgaris
Potri.009G055800 Populus trichocarpa
Prupe.2G023200 Prunus persica
Psat7g150920 Pisum sativum
QL04p010443 Quercus lobata
RcHm_v2.0_Chr1g0318291 Rosa chinensis
Rhsim01G0124900 Rhododendron simsii
Rhsim07G0059100 Rhododendron simsii
Sabra09G0040900 Salix brachista
SalBow1G2857 Salvia bowleyana
SalBow5G4465 Salvia bowleyana
SalBow5G4816 Salvia bowleyana
Sc14g0004980 Simmondsia chinensis
Sed0006814 Sechium edule
Sed0007712 Sechium edule
Sed0019738 Sechium edule
Sed0023192 Sechium edule
SGA_v2.0_scaffold354G49753 Striga asiatica
SGA_v2.0_scaffold4G02475 Striga asiatica
Solyc01g087980.4 Solanum lycopersicum
Solyc04g050200.1 Solanum lycopersicum
Sopen01g034880 Solanum pennellii
TAR633G0887 Trochodendron aralioides
THA.LOC104827430 Tarenaya hassleriana
Thecc.01G404600 Theobroma cacao
TPR.G14571 Trifolium pratense
TPR.G21941 Trifolium pratense
TPR.G40170 Trifolium pratense
TPR.G40619 Trifolium pratense
TPR.G8349 Trifolium pratense
TWI09G0588 Tripterygium wilfordii
TWI73G0029 Tripterygium wilfordii
unitig_22.g5431 Utricularia gibba
vmacro13699 Vaccinium macrocarpon
vmacro13701 Vaccinium macrocarpon
VMungo1080G0219 Vigna mungo

User provided reference genes

Program Settings