Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p32890 Brassica napus
Aa31LG1G22070 Aethionema arabicum
Actinidia05278 Actinidia chinensis
AL6G12100 Arabidopsis lyrata
Aqoxy2G01885 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.UD3AFU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z3T1FA Arachis hypogaea
AT5G02830 Arabidopsis thaliana
ATR0594G196 Amborella trichopoda
Atru.chr8.2537 Acer truncatum
Atru.chr8.2538 Acer truncatum
AUR62040527 Chenopodium quinoa
AUR62042917 Chenopodium quinoa
BcaC06g32013 Brassica carinata
BolC9t60116H Brassica oleracea
BraA10t45326Z Brassica rapa
C09p73820 Brassica napus
CAN.G350.45 Capsicum annuum
CANSAT80G1630 Cannabis sativa
CARHR210500 Cardamine hirsuta
Carub.0006s0163 Capsella rubella
Ca_08818_v3 Cicer arietinum L.
CBR_g39241 Chara braunii
Cc06_g03420 Coffea canephora
CDE02G1389 Ceratophyllum demersum
Cfa017487 Carpinus fangiana
Ciclev10011055m.g Citrus clementina
CiPaw.09G181900 Carya illinoinensis
ClCG04G008780 Citrullus lanatus
COL.COLO4_27102 Corchorus olitorius
Cpa.g.sc45.26 Carica papaya
CsaV3_4G024380 Cucumis sativus L.
CSS0009185 Camellia sinensis var. sinensis
DCAR_017721 Daucus carota
Dinv35696 Davidia involucrata
Duzib128G0648 Durio zibethinus
EL10Ac7g17325 Beta vulgaris
Eucgr.K03203 Eucalyptus grandis
FAN05G0960 Fragaria x ananassa
FAN09G1206 Fragaria x ananassa
FAN14G4814 Fragaria x ananassa
FvH4_6g15120 Fragaria vesca
Glyma.03G177000 Glycine max
Glyma.19G177700 Glycine max
Gohir.A04G077100 Gossypium hirsutum
Gohir.D04G116200 Gossypium hirsutum
Gorai.009G420800 Gossypium raimondii
GSVIVG01025541001 Vitis vinifera
HanXRQChr05g0129241 Helianthus annuus
HanXRQChr11g0334591 Helianthus annuus
Haze_20670 Corylus avellana
Hma1.2p1_0111F.1_g053700 Hydrangea macrophylla
Hma1.2p1_0111F.1_g053720 Hydrangea macrophylla
HPP92_003603 Vanilla planifolia
Hund12063 Selenicereus undatus
Lalb_Chr20g0112911 Lupinus albus
Lj1g0014647 Lotus japonicus
Lj3C977G16 Lonicera japonica
Lsat_1_v5_gn_2_109900 Lactuca sativa
Manes.08G001800 Manihot esculenta
Mapoly0039s0098 Marchantia polymorpha
MBI05_g33311_MAGBIO Magnolia biondii
MCO08G298 Micromonas commoda
MD12G1126500 Malus domestica
Medtr7g100550 Medicago truncatula
MELO3C003069.2 Cucumis melo
Migut.J00404 Erythranthe guttata
MSTRG.19128 Avicennia marina
Nitab4.5_0000848g0180 Nicotiana tabacum
Nitab4.5_0006316g0040 Nicotiana tabacum
Nn1g01467 Nelumbo nucifera
Nn1g07072 Nelumbo nucifera
Nn2g12960 Nelumbo nucifera
Oeu027653.1 Olea europaea
Oeu034822.1 Olea europaea
Os03g0284900 Oryza sativa ssp. japonica
Peaxi162Scf00005g05111 Petunia axillaris
PGR004G2266 Punica granatum
Phvul.001G174000 Phaseolus vulgaris
Potri.006G132700 Populus trichocarpa
Pp3c21_12360 Physcomitrium patens
Pp3c22_3070 Physcomitrium patens
Pp3c22_3080 Physcomitrium patens
PRCOL_00006441 Prasinoderma coloniale
Prupe.6G243100 Prunus persica
Psat3g045920 Pisum sativum
PSO339G1446 Papaver somniferum
PSO384G2670 Papaver somniferum
QL07p045556 Quercus lobata
RcHm_v2.0_Chr3g0468351 Rosa chinensis
RcHm_v2.0_Chr3g0468421 Rosa chinensis
Rhsim04G0181000 Rhododendron simsii
Sabra06G0104200 Salix brachista
SalBow3G1198 Salvia bowleyana
Sc01g0003660 Simmondsia chinensis
Sed0027238 Sechium edule
SEGI_02163 Sequoiadendron giganteum
SGA_v2.0_scaffold126G33879 Striga asiatica
SMO351G0222 Selaginella moellendorffii
Solyc09g007200.4 Solanum lycopersicum
Sopen09g002070 Solanum pennellii
Sp6g39750 Schrenkiella parvula
TAR633G1446 Trochodendron aralioides
THA.LOC104826989 Tarenaya hassleriana
Thecc.05G052200 Theobroma cacao
Thhalv10012661m.g Eutrema salsugineum
TPR.G36926 Trifolium pratense
TWI18G0316 Tripterygium wilfordii
unitig_16.g32855 Utricularia gibba
vmacro08689 Vaccinium macrocarpon
VMungo1383G0332 Vigna mungo
Zm00001eb397200 Zea mays

User provided reference genes

Program Settings