Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG2G17720 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis
Ah.10g035800 Amaranthus hybridus
Ah.16g104500 Amaranthus hybridus
AL7G19610 Arabidopsis lyrata
Aqoxy7G03649 Aquilegia oxysepala
AT4G32260 Arabidopsis thaliana
ATR0071G034 Amborella trichopoda
ATR0743G144 Amborella trichopoda
ATR0800G074 Amborella trichopoda
ATR0829G181 Amborella trichopoda
Atru.chr7.2441 Acer truncatum
AUR62012407 Chenopodium quinoa
AUR62031529 Chenopodium quinoa
BcaC09g52005 Brassica carinata
BolC1t00671H Brassica oleracea
BraA01t00579Z Brassica rapa
CAN.G1230.3 Capsicum annuum
CANSAT25G0532 Cannabis sativa
CARHR240140 Cardamine hirsuta
Carub.0007s0834 Capsella rubella
Ca_15742_v3 Cicer arietinum L.
CBR_g39245 Chara braunii
Cc08_g00530 Coffea canephora
CDE02G1895 Ceratophyllum demersum
CDE08G0375 Ceratophyllum demersum
Cfa013136 Carpinus fangiana
Ciclev10009435m.g Citrus clementina
CiPaw.03G162500 Carya illinoinensis
CiPaw.05G145000 Carya illinoinensis
ClCG08G013430 Citrullus lanatus
COL.COLO4_18868 Corchorus olitorius
Cpa.g.sc217.8 Carica papaya
Cre11.g481450 Chlamydomonas reinhardtii
CsaV3_2G032160 Cucumis sativus L.
CSS0028708 Camellia sinensis var. sinensis
CSS0035808 Camellia sinensis var. sinensis
Dinv08635 Davidia involucrata
Duzib150G1121 Durio zibethinus
Duzib168G1945 Durio zibethinus
ECA233G2559 Erigeron canadensis
EL10Ac2g04205 Beta vulgaris
Eucgr.C02765 Eucalyptus grandis
FAN20G2791 Fragaria x ananassa
FvH4_2g28951 Fragaria vesca
Glyma.04G066000 Glycine max
Glyma.06G067400 Glycine max
Gohir.A07G028825 Gossypium hirsutum
Gohir.D07G032851 Gossypium hirsutum
HanXRQChr13g0403031 Helianthus annuus
Haze_21505 Corylus avellana
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla
HPP92_017015 Vanilla planifolia
HPP92_017087 Vanilla planifolia
Lalb_Chr08g0244131 Lupinus albus
Lj1g0026662 Lotus japonicus
Lj7A724T61 Lonicera japonica
Lsat_1_v5_gn_6_21280 Lactuca sativa
Manes.03G013900 Manihot esculenta
Manes.16G122700 Manihot esculenta
Mapoly0061s0013 Marchantia polymorpha
MBI18_g07570_MAGBIO Magnolia biondii
MCO01G691 Micromonas commoda
MD15G1126100 Malus domestica
Medtr3g106820 Medicago truncatula
MELO3C011269.2 Cucumis melo
Migut.A00035 Erythranthe guttata
Nitab4.5_0000109g0380 Nicotiana tabacum
Nitab4.5_0002042g0090 Nicotiana tabacum
Nitab4.5_0003634g0020 Nicotiana tabacum
Nitab4.5_0011986g0010 Nicotiana tabacum
Nn2g12100 Nelumbo nucifera
Oeu057296.2 Olea europaea
Os03g0278900 Oryza sativa ssp. japonica
PGR044G2669 Punica granatum
PGSC0003DMG400020466 Solanum tuberosum
PGSC0003DMG400020484 Solanum tuberosum
Phvul.009G092366 Phaseolus vulgaris
Potri.006G255600 Populus trichocarpa
Potri.018G026500 Populus trichocarpa
Pp3c16_15270 Physcomitrium patens
Pp3c5_7810 Physcomitrium patens
Pp3c6_23221 Physcomitrium patens
PRCOL_00004936 Prasinoderma coloniale
Prupe.1G482000 Prunus persica
Psat2g007880 Pisum sativum
PSO210G2345 Papaver somniferum
PSO210G6161 Papaver somniferum
QL02p021503 Quercus lobata
RcHm_v2.0_Chr4g0429151 Rosa chinensis
RcHm_v2.0_Chr6g0297791 Rosa chinensis
Rhsim02G0202100 Rhododendron simsii
Sabra06G0199900 Salix brachista
Sabra18G0029100 Salix brachista
Sc09g0008150 Simmondsia chinensis
Sed0021254 Sechium edule
SEGI_36293 Sequoiadendron giganteum
SGA_v2.0_scaffold20G09112 Striga asiatica
SMO347G0047 Selaginella moellendorffii
Solyc06g065990.1 Solanum lycopersicum
Solyc06g066000.3 Solanum lycopersicum
Sopen06g024470 Solanum pennellii
Sopen06g024480 Solanum pennellii
Sp7g29990 Schrenkiella parvula
TAR625G1529 Trochodendron aralioides
Thecc.09G023500 Theobroma cacao
Thhalv10026214m.g Eutrema salsugineum
TPR.G3111 Trifolium pratense
TWI32G1182 Tripterygium wilfordii
unitig_32.g11115 Utricularia gibba
VMungo1309G2169 Vigna mungo
Zm00001eb397520 Zea mays

User provided reference genes

Program Settings