Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Ah.02g129680 Amaranthus hybridus
Ah.03g135070 Amaranthus hybridus
arahy.Tifrunner.gnm1.ann1.2U9IP4 Arachis hypogaea
Atru.chr9.225 Acer truncatum
Cc00_g23090 Coffea canephora
Cfa008979 Carpinus fangiana
Ciclev10023845m.g Citrus clementina
Ciclev10033178m.g Citrus clementina
CiPaw.05G135100 Carya illinoinensis
CiPaw.06G085100 Carya illinoinensis
CiPaw.11G044600 Carya illinoinensis
CiPaw.12G013300 Carya illinoinensis
ClCG04G012240 Citrullus lanatus
ClCG11G009950 Citrullus lanatus
COL.COLO4_09292 Corchorus olitorius
COL.COLO4_23015 Corchorus olitorius
CsaV3_1G002320 Cucumis sativus L.
CsaV3_1G005510 Cucumis sativus L.
CsaV3_2G010680 Cucumis sativus L.
CSS0030953 Camellia sinensis var. sinensis
CSS0036898 Camellia sinensis var. sinensis
CSS0038022 Camellia sinensis var. sinensis
CSS0038065 Camellia sinensis var. sinensis
DCAR_016556 Daucus carota
DCAR_027414 Daucus carota
DCAR_031024 Daucus carota
Dinv19962 Davidia involucrata
Duzib268G0913 Durio zibethinus
Eucgr.B03446 Eucalyptus grandis
Eucgr.G02504 Eucalyptus grandis
FAN04G0033 Fragaria x ananassa
FAN08G2460 Fragaria x ananassa
FAN13G0716 Fragaria x ananassa
FvH4_5g14931 Fragaria vesca
Glyma.04G169400 Glycine max
Glyma.05G026700 Glycine max
Glyma.06G194000 Glycine max
Glyma.17G100200 Glycine max
Gohir.A03G101000 Gossypium hirsutum
Gohir.A04G147500 Gossypium hirsutum
Gohir.A05G183700 Gossypium hirsutum
Gohir.A11G031151 Gossypium hirsutum
Gohir.A12G165100 Gossypium hirsutum
Gohir.A12G177500 Gossypium hirsutum
Gohir.D02G125800 Gossypium hirsutum
Gohir.D04G191800 Gossypium hirsutum
Gohir.D05G304900 Gossypium hirsutum
Gohir.D11G034500 Gossypium hirsutum
Gohir.D12G168200 Gossypium hirsutum
Gohir.D12G179900 Gossypium hirsutum
Gorai.005G141500 Gossypium raimondii
Gorai.008G181100 Gossypium raimondii
Gorai.008G193000 Gossypium raimondii
Gorai.009G324600 Gossypium raimondii
Gorai.012G187200 Gossypium raimondii
Haze_12011 Corylus avellana
Lalb_Chr12g0196861 Lupinus albus
Lalb_Chr13g0303241 Lupinus albus
Lj1g0007220 Lotus japonicus
Lj4g0000471 Lotus japonicus
Lsat_1_v5_gn_4_108521 Lactuca sativa
Lsat_1_v5_gn_5_19601 Lactuca sativa
Lsat_1_v5_gn_8_52521 Lactuca sativa
Lsat_1_v5_gn_9_15420 Lactuca sativa
Manes.01G185500 Manihot esculenta
Manes.05G101400 Manihot esculenta
Manes.06G092300 Manihot esculenta
Manes.14G078100 Manihot esculenta
Medtr3g037730 Medicago truncatula
MELO3C001984.2 Cucumis melo
MELO3C017172.2 Cucumis melo
Migut.D01817 Erythranthe guttata
Migut.E00089 Erythranthe guttata
Migut.I00178 Erythranthe guttata
Migut.L01293 Erythranthe guttata
Nitab4.5_0000145g0050 Nicotiana tabacum
Nn3g17242 Nelumbo nucifera
Nn4g23168 Nelumbo nucifera
Oeu047297.1 Olea europaea
Oeu054876.1 Olea europaea
Os08g0438701 Oryza sativa ssp. japonica
Peaxi162Scf00222g00814 Petunia axillaris
Peaxi162Scf00911g00042 Petunia axillaris
PGSC0003DMG400018456 Solanum tuberosum
PGSC0003DMG400023201 Solanum tuberosum
Phvul.003G190100 Phaseolus vulgaris
Phvul.009G187200 Phaseolus vulgaris
Potri.008G086100 Populus trichocarpa
Potri.010G169300 Populus trichocarpa
Prupe.1G274800 Prunus persica
Prupe.5G193600 Prunus persica
QL10p017020 Quercus lobata
RcHm_v2.0_Chr4g0439851 Rosa chinensis
RcHm_v2.0_Chr7g0181441 Rosa chinensis
Rhsim12G0063900 Rhododendron simsii
Sabra08G0063800 Salix brachista
Sabra10G0129100 Salix brachista
SalBow7G4253 Salvia bowleyana
Sc14g0008140 Simmondsia chinensis
Sed0002990 Sechium edule
Sed0011431 Sechium edule
Sed0013252 Sechium edule
Sed0016779 Sechium edule
Sed0019012 Sechium edule
Sed0025401 Sechium edule
Solyc05g007650.1 Solanum lycopersicum
TAR371G0768 Trochodendron aralioides
TAR374G0516 Trochodendron aralioides
Thecc.02G346100 Theobroma cacao
Thecc.03G087500 Theobroma cacao
unitig_52.g17506 Utricularia gibba
unitig_8.g3197 Utricularia gibba

User provided reference genes

Program Settings