Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04290 Brassica napus
Aa31LG2G16580 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2172 Anthoceros agrestis
Ah.02g110780 Amaranthus hybridus
AL7G17230 Arabidopsis lyrata
Aqoxy3G02825 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4N1ELM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G5F0QK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HJ5DAC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JE9H0F Arachis hypogaea
AT4G34140 Arabidopsis thaliana
ATR1152G054 Amborella trichopoda
AUR62008170 Chenopodium quinoa
AUR62028747 Chenopodium quinoa
BolC1t00453H Brassica oleracea
BraA01t00418Z Brassica rapa
C01p04690 Brassica napus
CAN.G338.9 Capsicum annuum
CANSAT80G0092 Cannabis sativa
CARHR242710 Cardamine hirsuta
Carub.0007s0626 Capsella rubella
Ca_16151_v3 Cicer arietinum L.
CBR_g4092 Chara braunii
Cc04_g12600 Coffea canephora
CDE06G1300 Ceratophyllum demersum
Cfa019177 Carpinus fangiana
Ciclev10023760m.g Citrus clementina
CiPaw.11G022400 Carya illinoinensis
ClCG06G017230 Citrullus lanatus
COL.COLO4_30124 Corchorus olitorius
Cpa.g.sc35.77 Carica papaya
Cpa.g.sc35.79 Carica papaya
CsaV3_1G001260 Cucumis sativus L.
CSS0002377 Camellia sinensis var. sinensis
CSS0004033 Camellia sinensis var. sinensis
CSS0021917 Camellia sinensis var. sinensis
CSS0035417 Camellia sinensis var. sinensis
CSS0048681 Camellia sinensis var. sinensis
DCAR_016469 Daucus carota
Dinv38554 Davidia involucrata
Duzib205G1440 Durio zibethinus
ECA247G4072 Erigeron canadensis
EL10Ac5g10689 Beta vulgaris
Eucgr.K02814 Eucalyptus grandis
FAN04G1276 Fragaria x ananassa
FAN08G1021 Fragaria x ananassa
FAN18G1088 Fragaria x ananassa
FvH4_5g05850 Fragaria vesca
Glyma.04G186500 Glycine max
Glyma.06G179301 Glycine max
Gohir.A03G091750 Gossypium hirsutum
Gohir.D02G120200 Gossypium hirsutum
Gorai.005G133700 Gossypium raimondii
GSVIVG01007682001 Vitis vinifera
HanXRQChr04g0101311 Helianthus annuus
Haze_07555 Corylus avellana
HPP92_000296 Vanilla planifolia
HPP92_000303 Vanilla planifolia
HPP92_000304 Vanilla planifolia
HPP92_000312 Vanilla planifolia
Hund02770 Selenicereus undatus
Lalb_Chr11g0070341 Lupinus albus
Lj1g0004270 Lotus japonicus
Lj5A128T65 Lonicera japonica
Lsat_1_v5_gn_1_28080 Lactuca sativa
Manes.14G062600 Manihot esculenta
Mapoly0102s0046 Marchantia polymorpha
MBI10_g32034_MAGBIO Magnolia biondii
MD14G1175400 Malus domestica
Medtr3g077300 Medicago truncatula
MELO3C026274.2 Cucumis melo
Migut.O00134 Erythranthe guttata
Nitab4.5_0001284g0100 Nicotiana tabacum
Nitab4.5_0010304g0020 Nicotiana tabacum
Nitab4.5_0022301g0010 Nicotiana tabacum
Oeu015893.1 Olea europaea
Oeu040853.3 Olea europaea
Os01g0170100 Oryza sativa ssp. japonica
Peaxi162Scf00089g01519 Petunia axillaris
PGR044G1978 Punica granatum
PGSC0003DMG400018175 Solanum tuberosum
Phvul.009G175500 Phaseolus vulgaris
Potri.002G197500 Populus trichocarpa
Pp3c25_4990 Physcomitrium patens
Prupe.5G169300 Prunus persica
Psat0s2597g0120 Pisum sativum
PSO063G2349 Papaver somniferum
PSO832G3615 Papaver somniferum
QL10p008493 Quercus lobata
QL10p008625 Quercus lobata
RcHm_v2.0_Chr7g0192971 Rosa chinensis
Rhsim12G0166600 Rhododendron simsii
Sabra02G0160000 Salix brachista
Sc04g0001640 Simmondsia chinensis
Sed0005220 Sechium edule
SEGI_13994 Sequoiadendron giganteum
SEGI_21151 Sequoiadendron giganteum
SGA_v2.0_scaffold90G27867 Striga asiatica
SGA_v2.0_scaffold90G27870 Striga asiatica
SGA_v2.0_scaffold90G27873 Striga asiatica
Solyc03g112510.2 Solanum lycopersicum
Sopen03g031570 Solanum pennellii
Sp7g31890 Schrenkiella parvula
TAR629G3400 Trochodendron aralioides
THA.LOC104809251 Tarenaya hassleriana
Thecc.03G023800 Theobroma cacao
Thhalv10025133m.g Eutrema salsugineum
TPR.G31056 Trifolium pratense
TWI39G1151 Tripterygium wilfordii
unitig_26.g9614 Utricularia gibba
vmacro16631 Vaccinium macrocarpon
vmacro16632 Vaccinium macrocarpon
Zm00001eb122970 Zea mays

User provided reference genes

Program Settings