Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG3G5950 Aethionema arabicum
Actinidia18498 Actinidia chinensis
Actinidia33078 Actinidia chinensis
Ah.11g051500 Amaranthus hybridus
AL8G24330 Arabidopsis lyrata
Aqoxy3G01075 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8EVS5A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C4KUF7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QZS15H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XM6SM1 Arachis hypogaea
AT5G50290 Arabidopsis thaliana
ATR1091G092 Amborella trichopoda
Atru.chr9.2498 Acer truncatum
AUR62008193 Chenopodium quinoa
AUR62010094 Chenopodium quinoa
AUR62013090 Chenopodium quinoa
AUR62030945 Chenopodium quinoa
BcaC01g04821 Brassica carinata
BolC3t15669H Brassica oleracea
CAN.G1166.7 Capsicum annuum
CANSAT80G1271 Cannabis sativa
CARHR258290 Cardamine hirsuta
Carub.0008s1033 Capsella rubella
Cc04_g12160 Coffea canephora
CDE06G0142 Ceratophyllum demersum
CDE07G0339 Ceratophyllum demersum
Cfa019116 Carpinus fangiana
Cfa019153 Carpinus fangiana
Ciclev10021329m.g Citrus clementina
CiPaw.11G024400 Carya illinoinensis
ClCG01G013240 Citrullus lanatus
COL.COLO4_30074 Corchorus olitorius
CsaV3_1G008600 Cucumis sativus L.
CSS0027584 Camellia sinensis var. sinensis
DCAR_026151 Daucus carota
Dinv21620 Davidia involucrata
Duzib205G1110 Durio zibethinus
ECA234G4429 Erigeron canadensis
EL10Ac5g10729 Beta vulgaris
Eucgr.D01123 Eucalyptus grandis
Eucgr.K02828 Eucalyptus grandis
FAN04G1270 Fragaria x ananassa
FAN08G0829 Fragaria x ananassa
FAN13G1261 Fragaria x ananassa
FAN18G1856 Fragaria x ananassa
FAN18G4133 Fragaria x ananassa
FvH4_5g05500 Fragaria vesca
Glyma.05G039000 Glycine max
Gohir.A07G063300 Gossypium hirsutum
Gohir.D07G068000 Gossypium hirsutum
Gorai.001G071500 Gossypium raimondii
GSVIVG01007721001 Vitis vinifera
HanXRQChr05g0132701 Helianthus annuus
Haze_07528 Corylus avellana
Hma1.2p1_0592F.1_g185480 Hydrangea macrophylla
HPP92_013444 Vanilla planifolia
Lalb_Chr07g0182811 Lupinus albus
Lj4g0005484 Lotus japonicus
Lj5P125T39 Lonicera japonica
Lsat_1_v5_gn_5_15080 Lactuca sativa
Manes.06G106200 Manihot esculenta
Manes.14G064100 Manihot esculenta
MBI16_g39219_MAGBIO Magnolia biondii
MD06G1172100 Malus domestica
MD14G1178000 Malus domestica
Medtr4g105550 Medicago truncatula
MELO3C002274.2 Cucumis melo
Migut.D01958 Erythranthe guttata
MSTRG.4369 Avicennia marina
Nitab4.5_0000025g0540 Nicotiana tabacum
Nitab4.5_0000514g0040 Nicotiana tabacum
Nitab4.5_0001514g0030 Nicotiana tabacum
Nitab4.5_0008678g0010 Nicotiana tabacum
Nn4g22712 Nelumbo nucifera
Oeu023436.1 Olea europaea
Os05g0409100 Oryza sativa ssp. japonica
Peaxi162Scf00089g01843 Petunia axillaris
Peaxi162Scf00255g01020 Petunia axillaris
PGR044G1382 Punica granatum
PGSC0003DMG400001713 Solanum tuberosum
PGSC0003DMG400034090 Solanum tuberosum
Phvul.003G201900 Phaseolus vulgaris
Potri.015G078700 Populus trichocarpa
Prupe.5G171500 Prunus persica
Psat4g058480 Pisum sativum
PSO063G0134 Papaver somniferum
PSO782G5321 Papaver somniferum
QL10p009812 Quercus lobata
QL10p010900 Quercus lobata
RcHm_v2.0_Chr7g0193341 Rosa chinensis
Rhsim08G0173900 Rhododendron simsii
Sabra15G0103200 Salix brachista
SalBow6G1770 Salvia bowleyana
SalBow6G6643 Salvia bowleyana
Sc04g0001720 Simmondsia chinensis
Sed0017346 Sechium edule
SEGI_33971 Sequoiadendron giganteum
SEGI_36446 Sequoiadendron giganteum
SGA_v2.0_scaffold7G04146 Striga asiatica
SHI17113 Sapria himalayana
Solyc03g112790.3 Solanum lycopersicum
Sopen03g031870 Solanum pennellii
TAR629G1645 Trochodendron aralioides
THA.LOC104808312 Tarenaya hassleriana
Thecc.03G014700 Theobroma cacao
Thhalv10015664m.g Eutrema salsugineum
Thhalv10015843m.g Eutrema salsugineum
Thhalv10023817m.g Eutrema salsugineum
TPR.G37525 Trifolium pratense
TWI23G1220 Tripterygium wilfordii
unitig_0.g795 Utricularia gibba
VMungo1215G2215 Vigna mungo
Zm00001eb023730 Zea mays

User provided reference genes

Program Settings