Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p26510 Brassica napus
A05p11040 Brassica napus
A07p10060 Brassica napus
A09p36350 Brassica napus
Aa31LG10G6790 Aethionema arabicum
Aa31LG6G5540 Aethionema arabicum
AL1G44090 Arabidopsis lyrata
AL270U10020 Arabidopsis lyrata
AL4G30590 Arabidopsis lyrata
AL700U10010 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.0G1Q0G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4BL86F Arachis hypogaea
AT1G30190 Arabidopsis thaliana
AT2G34610 Arabidopsis thaliana
Atru.chr10.1177 Acer truncatum
BcaB02g09522 Brassica carinata
BcaB03g13841 Brassica carinata
BcaB06g28786 Brassica carinata
BcaB07g32617 Brassica carinata
BcaC02g11538 Brassica carinata
BcaC05g27044 Brassica carinata
BcaC06g35492 Brassica carinata
BolC4t23006H Brassica oleracea
BolC4t27860H Brassica oleracea
BolC5t31631H Brassica oleracea
BolC7t42036H Brassica oleracea
BraA04t18155Z Brassica rapa
BraA05t20049Z Brassica rapa
BraA07t28799Z Brassica rapa
BraA09t39159Z Brassica rapa
C04p14170 Brassica napus
C04p63930 Brassica napus
C05p29030 Brassica napus
C07p15450 Brassica napus
CAN.G702.33 Capsicum annuum
CANSAT35G1578 Cannabis sativa
CARHR029240 Cardamine hirsuta
CARHR128710 Cardamine hirsuta
Carub.0001s2842 Capsella rubella
Carub.0004s1629 Capsella rubella
Ca_00533_v3 Cicer arietinum L.
Cfa000926 Carpinus fangiana
Cfa000927 Carpinus fangiana
Ciclev10017572m.g Citrus clementina
CiPaw.09G122000 Carya illinoinensis
CiPaw.10G090600 Carya illinoinensis
ClCG03G006810 Citrullus lanatus
COL.COLO4_31042 Corchorus olitorius
CsaV3_1G032390 Cucumis sativus L.
DCAR_003900 Daucus carota
Dinv05217 Davidia involucrata
Duzib235G1065 Durio zibethinus
Eucgr.E02421 Eucalyptus grandis
FAN11G3402 Fragaria x ananassa
FAN16G0984 Fragaria x ananassa
FAN21G0051 Fragaria x ananassa
FAN25G3808 Fragaria x ananassa
FvH4_3g05300 Fragaria vesca
Glyma.08G097500 Glycine max
Glyma.13G219300 Glycine max
Glyma.15G092900 Glycine max
Gohir.A05G147500 Gossypium hirsutum
Gohir.A06G138601 Gossypium hirsutum
Gohir.A10G042100 Gossypium hirsutum
Gohir.D05G150000 Gossypium hirsutum
Gohir.D06G143401 Gossypium hirsutum
Gohir.D10G043000 Gossypium hirsutum
Gorai.009G154100 Gossypium raimondii
Gorai.010G167100 Gossypium raimondii
Gorai.011G045600 Gossypium raimondii
Haze_05622 Corylus avellana
Hma1.2p1_0020F.1_g014170 Hydrangea macrophylla
Lalb_Chr18g0055351 Lupinus albus
Lalb_Chr20g0117821 Lupinus albus
Lj6g0018330 Lotus japonicus
Manes.15G123200 Manihot esculenta
Manes.17G071900 Manihot esculenta
MBI02_g24299_MAGBIO Magnolia biondii
MBI18_g24479_MAGBIO Magnolia biondii
MD05G1281700 Malus domestica
MD10G1260500 Malus domestica
Medtr2g019160 Medicago truncatula
MELO3C002739.2 Cucumis melo
Migut.M00897 Erythranthe guttata
Nn3g20397 Nelumbo nucifera
Nn4g26598 Nelumbo nucifera
Oeu034132.1 Olea europaea
Oeu052361.1 Olea europaea
PGR031G2887 Punica granatum
PGSC0003DMG400021166 Solanum tuberosum
Phvul.006G166000 Phaseolus vulgaris
Potri.004G065300 Populus trichocarpa
Potri.011G083600 Populus trichocarpa
Prupe.4G082900 Prunus persica
Psat1g191080 Pisum sativum
Psat1g191160 Pisum sativum
QL05p057294 Quercus lobata
Rhsim13G0115100 Rhododendron simsii
Sed0013579 Sechium edule
Sed0023002 Sechium edule
SGA_v2.0_scaffold1478G53958 Striga asiatica
SGA_v2.0_scaffold1G00191 Striga asiatica
Sp1g26010 Schrenkiella parvula
Sp4g16880 Schrenkiella parvula
THA.LOC104814307 Tarenaya hassleriana
THA.LOC104820655 Tarenaya hassleriana
Thecc.06G148300 Theobroma cacao
Thhalv10008361m.g Eutrema salsugineum
Thhalv10017803m.g Eutrema salsugineum
TPR.G26250 Trifolium pratense
TWI53G1156 Tripterygium wilfordii
TWI73G0984 Tripterygium wilfordii
VMungo0540G2047 Vigna mungo

User provided reference genes

Program Settings