Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p26620 Brassica napus
Aa31LG10G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis
Actinidia24658 Actinidia chinensis
Actinidia26210 Actinidia chinensis
AL1G64530 Arabidopsis lyrata
Aqoxy2G00253 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4L0SCR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea
AT1G54310 Arabidopsis thaliana
ATR0763G190 Amborella trichopoda
Atru.chr1.57 Acer truncatum
AUR62037650 Chenopodium quinoa
AUR62041050 Chenopodium quinoa
BcaB02g10820 Brassica carinata
BcaC05g28094 Brassica carinata
BolC5t32863H Brassica oleracea
BraA05t21537Z Brassica rapa
C05p41210 Brassica napus
CAN.G943.59 Capsicum annuum
CANSAT35G1572 Cannabis sativa
CARHR045980 Cardamine hirsuta
Carub.0001s4486 Capsella rubella
Ca_23083_v3 Cicer arietinum L.
Cc05_g16540 Coffea canephora
CDE01G0579 Ceratophyllum demersum
Ciclev10004974m.g Citrus clementina
CiPaw.11G057200 Carya illinoinensis
ClCG02G018710 Citrullus lanatus
COL.COLO4_24973 Corchorus olitorius
Cpa.g.sc32.92 Carica papaya
Cre09.g407900 Chlamydomonas reinhardtii
Cre16.g649400 Chlamydomonas reinhardtii
CsaV3_6G013460 Cucumis sativus L.
CSS0041382 Camellia sinensis var. sinensis
DCAR_009658 Daucus carota
Dinv42463 Davidia involucrata
Duzib213G0730 Durio zibethinus
ECA240G0752 Erigeron canadensis
Eucgr.K03462 Eucalyptus grandis
FAN11G3441 Fragaria x ananassa
FAN16G1770 Fragaria x ananassa
FAN25G0842 Fragaria x ananassa
FvH4_3g14100 Fragaria vesca
Glyma.08G234700 Glycine max
Gohir.A07G044000 Gossypium hirsutum
Gohir.D07G048400 Gossypium hirsutum
Gorai.001G051600 Gossypium raimondii
GSVIVG01036723001 Vitis vinifera
HanXRQChr03g0080291 Helianthus annuus
Haze_07765 Corylus avellana
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla
HPP92_028076 Vanilla planifolia
HPP92_028078 Vanilla planifolia
Lalb_Chr03g0031881 Lupinus albus
Lj2A10G39 Lonicera japonica
Lj3g0003258 Lotus japonicus
Lsat_1_v5_gn_4_131100 Lactuca sativa
Lsat_1_v5_gn_7_70001 Lactuca sativa
Manes.04G057176 Manihot esculenta
Manes.16G047900 Manihot esculenta
Mapoly0013s0085 Marchantia polymorpha
MCO09G574 Micromonas commoda
MD05G1238000 Malus domestica
MD05G1238100 Malus domestica
MD10G1216400 Malus domestica
MELO3C019630.2 Cucumis melo
Migut.M01505 Erythranthe guttata
Nitab4.5_0000029g0190 Nicotiana tabacum
Nitab4.5_0002862g0050 Nicotiana tabacum
Nn7g38366 Nelumbo nucifera
Os02g0173700 Oryza sativa ssp. japonica
Peaxi162Scf00452g00232 Petunia axillaris
PGR044G2241 Punica granatum
Phvul.011G179100 Phaseolus vulgaris
Potri.010G173800 Populus trichocarpa
Pp3c22_13410 Physcomitrium patens
PRCOL_00003223 Prasinoderma coloniale
PRCOL_00004733 Prasinoderma coloniale
Prupe.4G128300 Prunus persica
Psat4g170560 Pisum sativum
PSO675G0660 Papaver somniferum
PSO675G3863 Papaver somniferum
QL04p093744 Quercus lobata
RcHm_v2.0_Chr1g0324361 Rosa chinensis
RcHm_v2.0_Chr5g0023411 Rosa chinensis
Rhsim06G0244000 Rhododendron simsii
Rhsim06G0244100 Rhododendron simsii
Sabra10G0133700 Salix brachista
SalBow8G1251 Salvia bowleyana
SalBow8G1458 Salvia bowleyana
Sc03g0005020 Simmondsia chinensis
Sed0001021 Sechium edule
SEGI_31810 Sequoiadendron giganteum
SEGI_33801 Sequoiadendron giganteum
SGA_v2.0_scaffold112G31643 Striga asiatica
SGA_v2.0_scaffold186G40180 Striga asiatica
SGA_v2.0_scaffold60G20904 Striga asiatica
SMO145G0248 Selaginella moellendorffii
Sp1g41850 Schrenkiella parvula
TAR627G0473 Trochodendron aralioides
THA.LOC104810275 Tarenaya hassleriana
Thecc.07G189200 Theobroma cacao
Thhalv10011478m.g Eutrema salsugineum
TPR.G9404 Trifolium pratense
TWI59G0237 Tripterygium wilfordii
unitig_37.g12195 Utricularia gibba
vmacro11681 Vaccinium macrocarpon
VMungo1127G1118 Vigna mungo
Zm00001eb233280 Zea mays

User provided reference genes

Program Settings