Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p30310 Brassica napus
A04p30320 Brassica napus
Aa31LG5G19930 Aethionema arabicum
Ah.05g168610 Amaranthus hybridus
AL4G37190 Arabidopsis lyrata
Aqoxy3G02546 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea
AT2G39725 Arabidopsis thaliana
ATR0057G071 Amborella trichopoda
AUR62022356 Chenopodium quinoa
AUR62034352 Chenopodium quinoa
BcaB06g29104 Brassica carinata
BcaC02g07431 Brassica carinata
BolC4t28250H Brassica oleracea
BraA04t18476Z Brassica rapa
C04p67530 Brassica napus
CAN.G4100.1 Capsicum annuum
CAN.G608.33 Capsicum annuum
CANSAT25G3584 Cannabis sativa
CARHR134570 Cardamine hirsuta
Carub.0004s2178 Capsella rubella
Ca_24471_v3 Cicer arietinum L.
Cc10_g08690 Coffea canephora
Cfa019294 Carpinus fangiana
Ciclev10023082m.g Citrus clementina
CiPaw.15G066500 Carya illinoinensis
ClCG08G001090 Citrullus lanatus
COL.COLO4_06913 Corchorus olitorius
Cpa.g.sc19.285 Carica papaya
CsaV3_5G039970 Cucumis sativus L.
CSS0000179 Camellia sinensis var. sinensis
DCAR_006853 Daucus carota
DCAR_017595 Daucus carota
Duzib177G1207 Durio zibethinus
ECA248G1776 Erigeron canadensis
EL10Ac7g16149 Beta vulgaris
Eucgr.F02581 Eucalyptus grandis
FAN04G0010 Fragaria x ananassa
FAN08G2573 Fragaria x ananassa
FAN13G1882 Fragaria x ananassa
FAN18G1167 Fragaria x ananassa
FAN18G2563 Fragaria x ananassa
Glyma.11G013800 Glycine max
Gohir.A13G115800 Gossypium hirsutum
Gohir.D13G119000 Gossypium hirsutum
Gorai.013G133400 Gossypium raimondii
HanXRQChr04g0114811 Helianthus annuus
HanXRQChr10g0289041 Helianthus annuus
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla
HPP92_017350 Vanilla planifolia
Lalb_Chr03g0041921 Lupinus albus
LjContig00222g0016429 Lotus japonicus
Lsat_1_v5_gn_1_45401 Lactuca sativa
Manes.01G011600 Manihot esculenta
Mapoly0004s0187 Marchantia polymorpha
MBI13_g15314_MAGBIO Magnolia biondii
MBI13_g30327_MAGBIO Magnolia biondii
MCO05G024 Micromonas commoda
MD05G1008200 Malus domestica
MD10G1006000 Malus domestica
Medtr5g008340 Medicago truncatula
MELO3C022175.2 Cucumis melo
Migut.C01376 Erythranthe guttata
Nitab4.5_0000213g0160 Nicotiana tabacum
Nitab4.5_0000398g0030 Nicotiana tabacum
Nn5g27287 Nelumbo nucifera
Oeu023195.1 Olea europaea
Os08g0278600 Oryza sativa ssp. japonica
Peaxi162Scf00078g00061 Petunia axillaris
PGR042G0623 Punica granatum
PGSC0003DMG401002024 Solanum tuberosum
Phvul.002G036400 Phaseolus vulgaris
Potri.001G018100 Populus trichocarpa
Pp3c4_6780 Physcomitrium patens
Prupe.8G008400 Prunus persica
Prupe.8G008800 Prunus persica
Prupe.8G009100 Prunus persica
Prupe.8G009200 Prunus persica
Psat2g187280 Pisum sativum
Psat7g180080 Pisum sativum
Psat7g180120 Pisum sativum
Psat7g180160 Pisum sativum
Psat7g195680 Pisum sativum
PSO017G7166 Papaver somniferum
QL04p010524 Quercus lobata
RcHm_v2.0_Chr6g0251481 Rosa chinensis
RcHm_v2.0_Chr7g0212501 Rosa chinensis
RcHm_v2.0_Chr7g0212551 Rosa chinensis
RcHm_v2.0_Chr7g0212661 Rosa chinensis
Rhsim08G0116100 Rhododendron simsii
Sabra01G0012500 Salix brachista
Sabra01G0012700 Salix brachista
SalBow7G2968 Salvia bowleyana
Sc20g0003280 Simmondsia chinensis
Sed0002937 Sechium edule
SGA_v2.0_scaffold118G32610 Striga asiatica
SMO353G0203 Selaginella moellendorffii
Solyc04g077110.3 Solanum lycopersicum
Solyc09g007070.1 Solanum lycopersicum
Sopen00g005060 Solanum pennellii
Sopen09g001930 Solanum pennellii
Sp4g21990 Schrenkiella parvula
TAR624G0348 Trochodendron aralioides
TAR624G1340 Trochodendron aralioides
THA.LOC104824284 Tarenaya hassleriana
Thecc.08G177900 Theobroma cacao
Thhalv10017481m.g Eutrema salsugineum
TPR.G37942 Trifolium pratense
TWI12G1157 Tripterygium wilfordii
unitig_46.g17984 Utricularia gibba
VMungo1215G2220 Vigna mungo
Zm00001eb026180 Zea mays

User provided reference genes

Program Settings