Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p03310 Brassica napus
A08p12720 Brassica napus
Aa31LG2G12990 Aethionema arabicum
Actinidia10850 Actinidia chinensis
Actinidia31505 Actinidia chinensis
Ah.10g026860 Amaranthus hybridus
AL6G36200 Arabidopsis lyrata
AL7G37840 Arabidopsis lyrata
Aqoxy3G02722 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J4EMKX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XH35PM Arachis hypogaea
AT4G16807 Arabidopsis thaliana
ATR0057G113 Amborella trichopoda
Atru.chr9.1243 Acer truncatum
AUR62000471 Chenopodium quinoa
AUR62006813 Chenopodium quinoa
BcaB04g18396 Brassica carinata
BcaC07g38023 Brassica carinata
BolC8t48412H Brassica oleracea
BraA08t33261Z Brassica rapa
CAN.G62.13 Capsicum annuum
CAN.G62.14 Capsicum annuum
CANSAT21G2499 Cannabis sativa
CARHR223430 Cardamine hirsuta
Carub.0007s2455 Capsella rubella
Ca_24599_v3 Cicer arietinum L.
Ciclev10023353m.g Citrus clementina
Ciclev10023503m.g Citrus clementina
Ciclev10024423m.g Citrus clementina
CiPaw.12G048400 Carya illinoinensis
ClCG10G002400 Citrullus lanatus
COL.COLO4_10022 Corchorus olitorius
Cpa.g.sc1463.1 Carica papaya
Cpa.g.sc559.1 Carica papaya
Cpa.g.sc89.13 Carica papaya
CsaV3_3G002430 Cucumis sativus L.
CSS0008245 Camellia sinensis var. sinensis
CSS0009500 Camellia sinensis var. sinensis
DCAR_000643 Daucus carota
Dinv28849 Davidia involucrata
Duzib205G0846 Durio zibethinus
ECA240G0572 Erigeron canadensis
EL10Ac4g09553 Beta vulgaris
Eucgr.D02116 Eucalyptus grandis
FAN04G0327 Fragaria x ananassa
FAN08G2081 Fragaria x ananassa
FAN18G3895 Fragaria x ananassa
FAN18G3996 Fragaria x ananassa
FAN20G0731 Fragaria x ananassa
FAN24G2075 Fragaria x ananassa
FAN27G3081 Fragaria x ananassa
FvH4_2g33151 Fragaria vesca
FvH4_5g19900 Fragaria vesca
Glyma.01G206100 Glycine max
Gohir.A08G166600 Gossypium hirsutum
Gohir.D08G185400 Gossypium hirsutum
Gorai.004G194800 Gossypium raimondii
HanXRQChr11g0329491 Helianthus annuus
Haze_07962 Corylus avellana
Hma1.2p1_0821F.1_g224180 Hydrangea macrophylla
HPP92_022107 Vanilla planifolia
Hund11335 Selenicereus undatus
Lalb_Chr16g0379431 Lupinus albus
Lj2g0019775 Lotus japonicus
Lsat_1_v5_gn_4_126100 Lactuca sativa
Manes.02G042900 Manihot esculenta
MBI04_g41764_MAGBIO Magnolia biondii
MD06G1050900 Malus domestica
Medtr5g013080 Medicago truncatula
Medtr5g013140 Medicago truncatula
MELO3C013912.2 Cucumis melo
Migut.A01028 Erythranthe guttata
MSTRG.25515 Avicennia marina
Nitab4.5_0000506g0030 Nicotiana tabacum
Nitab4.5_0006375g0010 Nicotiana tabacum
Nn6g33825 Nelumbo nucifera
Oeu045675.1 Olea europaea
Oeu045687.1 Olea europaea
Os11g0249300 Oryza sativa ssp. japonica
Peaxi162Scf00190g01213 Petunia axillaris
PGR031G1177 Punica granatum
PGSC0003DMG400024159 Solanum tuberosum
Phvul.002G000400 Phaseolus vulgaris
Potri.003G080700 Populus trichocarpa
Prupe.4G179300 Prunus persica
Psat0s1776g0120 Pisum sativum
Psat2g146960 Pisum sativum
Psat2g156960 Pisum sativum
Psat2g177160 Pisum sativum
PSO063G2347 Papaver somniferum
QL12p009257 Quercus lobata
QL12p009685 Quercus lobata
RcHm_v2.0_Chr1g0325401 Rosa chinensis
RcHm_v2.0_Chr7g0204751 Rosa chinensis
Rhsim07G0117200 Rhododendron simsii
Rhsim07G0117500 Rhododendron simsii
Sabra03G0052300 Salix brachista
SalBow6G1440 Salvia bowleyana
Sc07g0009150 Simmondsia chinensis
Sed0008627 Sechium edule
SGA_v2.0_scaffold104G30204 Striga asiatica
Solyc06g060860.2 Solanum lycopersicum
Sopen06g021010 Solanum pennellii
Sp7g17290 Schrenkiella parvula
TAR375G0331 Trochodendron aralioides
THA.LOC104807915 Tarenaya hassleriana
Thecc.03G244500 Theobroma cacao
Thhalv10027153m.g Eutrema salsugineum
Thhalv10027163m.g Eutrema salsugineum
TPR.G17974 Trifolium pratense
TWI60G0889 Tripterygium wilfordii
unitig_744.g24476 Utricularia gibba
Zm00001eb428340 Zea mays

User provided reference genes

Program Settings