Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p20650 Brassica napus
Aa31LG2G12690 Aethionema arabicum
Actinidia14432 Actinidia chinensis
AL7G38210 Arabidopsis lyrata
AL7G38260 Arabidopsis lyrata
Aqoxy5G01014 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.R85P7C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WL6NYT Arachis hypogaea
AT4G16566 Arabidopsis thaliana
ATR0317G125 Amborella trichopoda
Atru.chr9.1322 Acer truncatum
AUR62007512 Chenopodium quinoa
AUR62042788 Chenopodium quinoa
BcaC06g33496 Brassica carinata
BcaC09g50373 Brassica carinata
BcaNung00171 Brassica carinata
BcaNung02861 Brassica carinata
BolC1t02559H Brassica oleracea
BolC7t45328H Brassica oleracea
BraA01t02001Z Brassica rapa
C01p26150 Brassica napus
CAN.G1227.14 Capsicum annuum
CANSAT21G0077 Cannabis sativa
CARHR223050 Cardamine hirsuta
Carub.0007s2484 Capsella rubella
Cc08_g12500 Coffea canephora
Cfa012711 Carpinus fangiana
Ciclev10022693m.g Citrus clementina
CiPaw.11G153700 Carya illinoinensis
CiPaw.12G109600 Carya illinoinensis
ClCG01G004020 Citrullus lanatus
COL.COLO4_37184 Corchorus olitorius
Cre03.g169200 Chlamydomonas reinhardtii
CsaV3_5G004200 Cucumis sativus L.
CSS0002961 Camellia sinensis var. sinensis
CSS0026472 Camellia sinensis var. sinensis
CSS0040909 Camellia sinensis var. sinensis
DCAR_027778 Daucus carota
Dinv21635 Davidia involucrata
Duzib205G0920 Durio zibethinus
ECA232G3888 Erigeron canadensis
EL10Ac5g13074 Beta vulgaris
Eucgr.E00427 Eucalyptus grandis
FAN02G0786 Fragaria x ananassa
FAN04G1478 Fragaria x ananassa
FAN05G5584 Fragaria x ananassa
FAN08G1843 Fragaria x ananassa
FAN13G0327 Fragaria x ananassa
FAN14G5160 Fragaria x ananassa
FAN18G0108 Fragaria x ananassa
FAN18G3883 Fragaria x ananassa
FvH4_5g18810 Fragaria vesca
Glyma.11G032300 Glycine max
Gohir.A08G170700 Gossypium hirsutum
Gohir.D08G188900 Gossypium hirsutum
Gorai.004G199000 Gossypium raimondii
GSVIVG01001319001 Vitis vinifera
HanXRQChr17g0549671 Helianthus annuus
Haze_07922 Corylus avellana
Haze_07923 Corylus avellana
Hma1.2p1_0316F.1_g123210 Hydrangea macrophylla
HPP92_021039 Vanilla planifolia
HPP92_027426 Vanilla planifolia
Hund14533 Selenicereus undatus
Hund14535 Selenicereus undatus
Lalb_Chr09g0324411 Lupinus albus
Lj2A217G30 Lonicera japonica
Lj2g0002187 Lotus japonicus
Lsat_1_v5_gn_5_187960 Lactuca sativa
Manes.02G039100 Manihot esculenta
MBI04_g09491_MAGBIO Magnolia biondii
MCO15G691 Micromonas commoda
MD04G1063700 Malus domestica
Medtr5g012525 Medicago truncatula
MELO3C005535.2 Cucumis melo
Migut.E00966 Erythranthe guttata
Migut.E01683 Erythranthe guttata
MSTRG.13772 Avicennia marina
Nitab4.5_0000712g0190 Nicotiana tabacum
Nitab4.5_0002225g0110 Nicotiana tabacum
Nn6g33971 Nelumbo nucifera
Oeu062969.1 Olea europaea
Os04g0535400 Oryza sativa ssp. japonica
Peaxi162Scf00102g01143 Petunia axillaris
Phvul.002G062701 Phaseolus vulgaris
Potri.003G076400 Populus trichocarpa
Pp3c5_26880 Physcomitrium patens
Prupe.5G068700 Prunus persica
Psat2g177560 Pisum sativum
PSO386G0128 Papaver somniferum
PSO724G0679 Papaver somniferum
QL12p012249 Quercus lobata
RcHm_v2.0_Chr7g0203161 Rosa chinensis
Sabra03G0047000 Salix brachista
SalBow6G3941 Salvia bowleyana
Sc22g0000840 Simmondsia chinensis
Sed0003740 Sechium edule
SEGI_08804 Sequoiadendron giganteum
SEGI_18261 Sequoiadendron giganteum
SMO274G0074 Selaginella moellendorffii
Solyc08g007380.4 Solanum lycopersicum
Sopen08g003330 Solanum pennellii
Sp7g15180 Schrenkiella parvula
TAR636G3191 Trochodendron aralioides
THA.LOC104815489 Tarenaya hassleriana
THA.LOC104815507 Tarenaya hassleriana
Thecc.03G252200 Theobroma cacao
Thhalv10026497m.g Eutrema salsugineum
TPR.G25905 Trifolium pratense
TWI60G0154 Tripterygium wilfordii
unitig_699.g19776 Utricularia gibba
vmacro16391 Vaccinium macrocarpon
VMungo1215G1202 Vigna mungo
Zm00001eb427450 Zea mays

User provided reference genes

Program Settings