Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG7G15150 Aethionema arabicum
Aa31LG7G15160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis
Actinidia11760 Actinidia chinensis
AL4G10540 Arabidopsis lyrata
Aqoxy5G01506 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea
AT2G21370 Arabidopsis thaliana
ATR0661G201 Amborella trichopoda
Atru.chr5.3113 Acer truncatum
AUR62010413 Chenopodium quinoa
AUR62016803 Chenopodium quinoa
BcaNung06381 Brassica carinata
BcaNung06382 Brassica carinata
BcaNung06994 Brassica carinata
BolC8t51722H Brassica oleracea
BraA09t41218Z Brassica rapa
C08p41600 Brassica napus
CAN.G341.5 Capsicum annuum
CANSAT11G0427 Cannabis sativa
CARHR112250 Cardamine hirsuta
Carub.0004s0040 Capsella rubella
Ca_20921_v3 Cicer arietinum L.
Cc02_g17050 Coffea canephora
CDE09G0328 Ceratophyllum demersum
CDE09G1160 Ceratophyllum demersum
Ciclev10028302m.g Citrus clementina
CiPaw.05G072000 Carya illinoinensis
ClCG11G003990 Citrullus lanatus
COL.COLO4_26024 Corchorus olitorius
Cpa.g.sc150.40 Carica papaya
Cre02.g098150 Chlamydomonas reinhardtii
CsaV3_2G015180 Cucumis sativus L.
CSS0044633 Camellia sinensis var. sinensis
DCAR_022800 Daucus carota
Dinv23472 Davidia involucrata
Duzib052G0475 Durio zibethinus
ECA246G1002 Erigeron canadensis
EL10Ac9g21613 Beta vulgaris
Eucgr.I01312 Eucalyptus grandis
FAN15G3154 Fragaria x ananassa
FAN20G0390 Fragaria x ananassa
FAN24G1057 Fragaria x ananassa
FvH4_2g10090 Fragaria vesca
Glyma.07G113951 Glycine max
Glyma.11G112600 Glycine max
Glyma.12G038500 Glycine max
Gohir.A13G031100 Gossypium hirsutum
Gohir.D13G029100 Gossypium hirsutum
Gorai.013G033100 Gossypium raimondii
GSVIVG01024202001 Vitis vinifera
HanXRQChr15g0479121 Helianthus annuus
Haze_02254 Corylus avellana
Haze_02264 Corylus avellana
Haze_02269 Corylus avellana
Haze_02305 Corylus avellana
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla
Hund06268 Selenicereus undatus
Lalb_Chr01g0002251 Lupinus albus
Lj3g0022597 Lotus japonicus
Lj5A191G48 Lonicera japonica
Lsat_1_v5_gn_3_43860 Lactuca sativa
Manes.04G085100 Manihot esculenta
Mapoly0010s0072 Marchantia polymorpha
MBI05_g05431_MAGBIO Magnolia biondii
MCO15G291 Micromonas commoda
MD10G1065800 Malus domestica
Medtr4g071230 Medicago truncatula
MELO3C023343.2 Cucumis melo
Migut.B00189 Erythranthe guttata
Nitab4.5_0001413g0070 Nicotiana tabacum
Nitab4.5_0003006g0030 Nicotiana tabacum
Nn6g32211 Nelumbo nucifera
Oeu008578.1 Olea europaea
Os07g0409200 Oryza sativa ssp. japonica
Peaxi162Scf00684g00133 Petunia axillaris
PGR142G2744 Punica granatum
PGSC0003DMG400009584 Solanum tuberosum
PGSC0003DMG400009674 Solanum tuberosum
Phvul.011G040600 Phaseolus vulgaris
Potri.009G122300 Populus trichocarpa
PRCOL_00006836 Prasinoderma coloniale
Prupe.8G087700 Prunus persica
Psat7g182480 Pisum sativum
PSO210G4381 Papaver somniferum
QL11p045675 Quercus lobata
QL11p045724 Quercus lobata
RcHm_v2.0_Chr3g0496591 Rosa chinensis
RcHm_v2.0_Chr4g0423361 Rosa chinensis
RcHm_v2.0_Chr6g0267041 Rosa chinensis
Rhsim11G0182100 Rhododendron simsii
SalBow6G2462 Salvia bowleyana
Sc14g0001940 Simmondsia chinensis
Sed0020159 Sechium edule
SGA_v2.0_scaffold58G20475 Striga asiatica
SMO115G0266 Selaginella moellendorffii
Solyc11g042950.1 Solanum lycopersicum
Sopen11g019320 Solanum pennellii
Sp4g00540 Schrenkiella parvula
TAR381G1513 Trochodendron aralioides
THA.LOC104804117 Tarenaya hassleriana
THA.LOC104804536 Tarenaya hassleriana
THA.LOC104824797 Tarenaya hassleriana
Thecc.02G077800 Theobroma cacao
Thhalv10000118m.g Eutrema salsugineum
TPR.G16229 Trifolium pratense
TPR.G30522 Trifolium pratense
TWI31G0693 Tripterygium wilfordii
unitig_744.g24262 Utricularia gibba
vmacro02066 Vaccinium macrocarpon
VMungo1127G1504 Vigna mungo
Zm00001eb094750 Zea mays

User provided reference genes

Program Settings