Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p28440 Brassica napus
A05p08660 Brassica napus
Aa31LG5G22570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3825 Anthoceros agrestis
Actinidia05279 Actinidia chinensis
AL4G33620 Arabidopsis lyrata
Aqoxy4G03151 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4131RS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GN5EPC Arachis hypogaea
AT2G37240 Arabidopsis thaliana
ATR0582G226 Amborella trichopoda
Atru.chr8.2534 Acer truncatum
BcaB02g09297 Brassica carinata
BcaC02g11844 Brassica carinata
BcaC03g14404 Brassica carinata
BcaC08g45103 Brassica carinata
BolC2t07948H Brassica oleracea
BolC4t22670H Brassica oleracea
BolC6t37885H Brassica oleracea
BraA05t19834Z Brassica rapa
C04p10750 Brassica napus
C06p27120 Brassica napus
CAN.G350.48 Capsicum annuum
CANSAT80G1842 Cannabis sativa
CARHR132350 Cardamine hirsuta
Carub.0004s1915 Capsella rubella
Ca_08817_v3 Cicer arietinum L.
Cc06_g03440 Coffea canephora
CDE04G0730 Ceratophyllum demersum
CDE07G1737 Ceratophyllum demersum
Cfa017486 Carpinus fangiana
Ciclev10013683m.g Citrus clementina
CiPaw.09G182200 Carya illinoinensis
CiPaw.09G182700 Carya illinoinensis
CiPaw.09G183100 Carya illinoinensis
ClCG04G008760 Citrullus lanatus
COL.COLO4_10283 Corchorus olitorius
COL.COLO4_27104 Corchorus olitorius
Cpa.g.sc45.24 Carica papaya
CsaV3_4G024400 Cucumis sativus L.
CSS0004845 Camellia sinensis var. sinensis
Duzib106G2062 Durio zibethinus
ECA238G1489 Erigeron canadensis
EL10Ac7g17323 Beta vulgaris
Eucgr.K03198 Eucalyptus grandis
FAN02G0668 Fragaria x ananassa
FAN09G4212 Fragaria x ananassa
FAN14G4602 Fragaria x ananassa
FvH4_6g15080 Fragaria vesca
Glyma.03G176900 Glycine max
Glyma.19G177600 Glycine max
Gohir.A09G160700 Gossypium hirsutum
Gohir.D09G156400 Gossypium hirsutum
Gorai.006G177900 Gossypium raimondii
GSVIVG01025554001 Vitis vinifera
HanXRQChr05g0129231 Helianthus annuus
Haze_20672 Corylus avellana
Hma1.2p1_0111F.1_g053680 Hydrangea macrophylla
Hma1.2p1_0111F.1_g053690 Hydrangea macrophylla
HPP92_003601 Vanilla planifolia
Hund12062 Selenicereus undatus
Lalb_Chr20g0112901 Lupinus albus
Lj1g0023744 Lotus japonicus
Lj3A977T52 Lonicera japonica
Lsat_1_v5_gn_2_109921 Lactuca sativa
Manes.08G001700 Manihot esculenta
Manes.09G070900 Manihot esculenta
Mapoly0154s0013 Marchantia polymorpha
MBI18_g34970_MAGBIO Magnolia biondii
MD12G1128400 Malus domestica
Medtr7g100540 Medicago truncatula
MELO3C003072.2 Cucumis melo
Migut.L01652 Erythranthe guttata
Nitab4.5_0000848g0140 Nicotiana tabacum
Nitab4.5_0010883g0010 Nicotiana tabacum
Nn2g10613 Nelumbo nucifera
Oeu029107.1 Olea europaea
Os01g0929967 Oryza sativa ssp. japonica
Os03g0284600 Oryza sativa ssp. japonica
Peaxi162Scf01517g00138 Petunia axillaris
PGR004G2860 Punica granatum
PGSC0003DMG400027897 Solanum tuberosum
PGSC0003DMG400031729 Solanum tuberosum
Phvul.001G173900 Phaseolus vulgaris
Potri.006G133100 Populus trichocarpa
Prupe.6G244000 Prunus persica
Psat3g045960 Pisum sativum
PSO063G4670 Papaver somniferum
PSO782G5617 Papaver somniferum
QL07p045588 Quercus lobata
RcHm_v2.0_Chr3g0468261 Rosa chinensis
RcHm_v2.0_Chr4g0422601 Rosa chinensis
Sabra06G0104600 Salix brachista
Sc20g0004190 Simmondsia chinensis
Sed0013795 Sechium edule
SEGI_25621 Sequoiadendron giganteum
SGA_v2.0_scaffold94G28656 Striga asiatica
SMO171G0126 Selaginella moellendorffii
SMO353G0028 Selaginella moellendorffii
SMO353G0397 Selaginella moellendorffii
Solyc09g007190.3 Solanum lycopersicum
Sopen09g002060 Solanum pennellii
Sp4g19560 Schrenkiella parvula
TAR633G0628 Trochodendron aralioides
THA.LOC104805324 Tarenaya hassleriana
Thecc.05G052000 Theobroma cacao
Thhalv10017137m.g Eutrema salsugineum
TPR.G39424 Trifolium pratense
TWI74G0989 Tripterygium wilfordii
unitig_746.g26783 Utricularia gibba
vmacro08688 Vaccinium macrocarpon
VMungo1383G1891 Vigna mungo
Zm00001eb013030 Zea mays
Zm00001eb110150 Zea mays

User provided reference genes

Program Settings