Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p30420 Brassica napus
Aa31LG8G6010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis
Actinidia00443 Actinidia chinensis
Actinidia12953 Actinidia chinensis
Ah.01g019040 Amaranthus hybridus
AL3G32600 Arabidopsis lyrata
Aqoxy6G01341 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea
AT3G19220 Arabidopsis thaliana
ATR0100G054 Amborella trichopoda
Atru.chr5.2709 Acer truncatum
AUR62016784 Chenopodium quinoa
BcaB06g25978 Brassica carinata
BcaC05g28522 Brassica carinata
BolC5t33329H Brassica oleracea
BraA05t21880Z Brassica rapa
CANSAT25G3754 Cannabis sativa
CARHR094630 Cardamine hirsuta
Carub.0003s1905 Capsella rubella
Ca_18680_v3 Cicer arietinum L.
CBR_g29933 Chara braunii
Cc02_g18740 Coffea canephora
CDE03G0325 Ceratophyllum demersum
CDE04G2473 Ceratophyllum demersum
Cfa004517 Carpinus fangiana
Ciclev10029362m.g Citrus clementina
CiPaw.06G172800 Carya illinoinensis
ClCG05G010000 Citrullus lanatus
COL.COLO4_32660 Corchorus olitorius
Cpa.g.sc62.15 Carica papaya
Cre07.g339200 Chlamydomonas reinhardtii
CsaV3_3G018570 Cucumis sativus L.
CSS0015269 Camellia sinensis var. sinensis
DCAR_022028 Daucus carota
Dinv23619 Davidia involucrata
Dinv42154 Davidia involucrata
ECA240G0576 Erigeron canadensis
ECA240G1411 Erigeron canadensis
EL10Ac9g21683 Beta vulgaris
FAN15G0654 Fragaria x ananassa
FAN20G2768 Fragaria x ananassa
FAN24G2553 Fragaria x ananassa
FvH4_2g06130 Fragaria vesca
Glyma.02G132900 Glycine max
Glyma.07G212100 Glycine max
Gohir.A13G040100 Gossypium hirsutum
Gohir.D13G038800 Gossypium hirsutum
Gorai.013G043500 Gossypium raimondii
GSVIVG01031751001 Vitis vinifera
HanXRQChr09g0251721 Helianthus annuus
Haze_10076 Corylus avellana
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla
Hund00236 Selenicereus undatus
Lalb_Chr16g0384701 Lupinus albus
Lj4g0019449 Lotus japonicus
Lj9A358T46 Lonicera japonica
Lsat_1_v5_gn_9_110080 Lactuca sativa
Manes.07G082700 Manihot esculenta
Mapoly0186s0009 Marchantia polymorpha
MBI06_g36648_MAGBIO Magnolia biondii
MD10G1094200 Malus domestica
Medtr4g086255 Medicago truncatula
MELO3C019509.2 Cucumis melo
Migut.B00344 Erythranthe guttata
MSTRG.27723 Avicennia marina
Nitab4.5_0002543g0040 Nicotiana tabacum
Nitab4.5_0005758g0030 Nicotiana tabacum
Nitab4.5_0007480g0010 Nicotiana tabacum
Nitab4.5_0012979g0010 Nicotiana tabacum
Nn1g04883 Nelumbo nucifera
Nn5g30258 Nelumbo nucifera
Oeu007283.1 Olea europaea
Oeu013707.1 Olea europaea
Os09g0458400 Oryza sativa ssp. japonica
Peaxi162Scf00016g01823 Petunia axillaris
PGR042G2146 Punica granatum
PGSC0003DMG400006210 Solanum tuberosum
PGSC0003DMG401025892 Solanum tuberosum
Phvul.003G292600 Phaseolus vulgaris
Potri.009G102400 Populus trichocarpa
Pp3c1_42880 Physcomitrium patens
Pp3c2_400 Physcomitrium patens
Prupe.8G124000 Prunus persica
Psat7g125000 Pisum sativum
PSO541G2619 Papaver somniferum
PSO675G2542 Papaver somniferum
QL11p035981 Quercus lobata
RcHm_v2.0_Chr6g0257061 Rosa chinensis
Rhsim11G0166200 Rhododendron simsii
Rhsim11G0166300 Rhododendron simsii
Sabra09G0078400 Salix brachista
SalBow6G3975 Salvia bowleyana
Sed0002892 Sechium edule
SEGI_10031 Sequoiadendron giganteum
SEGI_30369 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06591 Striga asiatica
SMO232G0067 Selaginella moellendorffii
Solyc01g108200.3 Solanum lycopersicum
Sopen01g050430 Solanum pennellii
Sopen10g021420 Solanum pennellii
Sopen10g021450 Solanum pennellii
Sp3g17290 Schrenkiella parvula
TAR381G0954 Trochodendron aralioides
THA.LOC104798819 Tarenaya hassleriana
Thecc.02G100400 Theobroma cacao
Thhalv10021599m.g Eutrema salsugineum
TPR.G28492 Trifolium pratense
TWI75G1380 Tripterygium wilfordii
unitig_26.g10239 Utricularia gibba
vmacro02203 Vaccinium macrocarpon
VMungo0251G0366 Vigna mungo
Zm00001eb100830 Zea mays

User provided reference genes

Program Settings