Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p07720 Brassica napus
Aa31sc108G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis
Actinidia15510 Actinidia chinensis
Actinidia17062 Actinidia chinensis
AL1G51350 Arabidopsis lyrata
Aqoxy6G01596 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea
AT1G42480 Arabidopsis thaliana
ATR0807G118 Amborella trichopoda
Atru.chr13.101 Acer truncatum
AUR62035144 Chenopodium quinoa
AUR62042577 Chenopodium quinoa
AUR62042580 Chenopodium quinoa
BcaB04g17781 Brassica carinata
BcaC07g37460 Brassica carinata
BolC8t47779H Brassica oleracea
BraA08t32785Z Brassica rapa
C08p09340 Brassica napus
CAN.G311.135 Capsicum annuum
CANSAT25G2394 Cannabis sativa
CARHR292440 Cardamine hirsuta
Carub.0001s3428 Capsella rubella
Ca_15400_v3 Cicer arietinum L.
CBR_g32467 Chara braunii
Cc04_g01910 Coffea canephora
CDE05G1284 Ceratophyllum demersum
Ciclev10002616m.g Citrus clementina
CiPaw.08G075600 Carya illinoinensis
ClCG11G018850 Citrullus lanatus
COL.COLO4_37754 Corchorus olitorius
Cre16.g661700 Chlamydomonas reinhardtii
CsaV3_4G037440 Cucumis sativus L.
CSS0014140 Camellia sinensis var. sinensis
DCAR_022937 Daucus carota
Dinv31968 Davidia involucrata
Duzib093G1136 Durio zibethinus
EL10Ac1g01910 Beta vulgaris
Eucgr.F01791 Eucalyptus grandis
FAN04G0342 Fragaria x ananassa
FAN08G2873 Fragaria x ananassa
FAN13G0505 Fragaria x ananassa
FAN18G2290 Fragaria x ananassa
FvH4_5g25650 Fragaria vesca
Glyma.04G016200 Glycine max
Glyma.06G016200 Glycine max
Gohir.A01G103400 Gossypium hirsutum
Gohir.D01G088700 Gossypium hirsutum
Gorai.002G114400 Gossypium raimondii
GSVIVG01013398001 Vitis vinifera
HanXRQChr08g0216381 Helianthus annuus
Haze_22833 Corylus avellana
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla
HPP92_001689 Vanilla planifolia
HPP92_012484 Vanilla planifolia
HPP92_012557 Vanilla planifolia
Hund05090 Selenicereus undatus
Lalb_Chr11g0061471 Lupinus albus
Lj1g0008636 Lotus japonicus
Lj4A809G49 Lonicera japonica
Lj6g0013692 Lotus japonicus
Lsat_1_v5_gn_8_27360 Lactuca sativa
Manes.13G069000 Manihot esculenta
Manes.18G003600 Manihot esculenta
MCO14G410 Micromonas commoda
MD06G1006600 Malus domestica
Medtr3g115880 Medicago truncatula
MELO3C017041.2 Cucumis melo
Migut.C00367 Erythranthe guttata
MSTRG.993 Avicennia marina
Nitab4.5_0009646g0030 Nicotiana tabacum
Nn5g31007 Nelumbo nucifera
Os02g0117200 Oryza sativa ssp. japonica
Peaxi162Scf00680g00121 Petunia axillaris
PGR083G2064 Punica granatum
PGSC0003DMG400009913 Solanum tuberosum
Phvul.009G006300 Phaseolus vulgaris
Potri.002G007601 Populus trichocarpa
Potri.005G253600 Populus trichocarpa
Pp3c3_21490 Physcomitrium patens
PRCOL_00006317 Prasinoderma coloniale
Prupe.5G008600 Prunus persica
Prupe.5G008700 Prunus persica
Psat5g009640 Pisum sativum
PSO541G4149 Papaver somniferum
QL02p015150 Quercus lobata
RcHm_v2.0_Chr7g0215941 Rosa chinensis
Rhsim06G0005000 Rhododendron simsii
Sabra02G0005900 Salix brachista
Sabra05G0196700 Salix brachista
SalBow7G2934 Salvia bowleyana
Sc26g0004680 Simmondsia chinensis
Sed0005335 Sechium edule
SEGI_04341 Sequoiadendron giganteum
SGA_v2.0_scaffold366G50030 Striga asiatica
SHI07962 Sapria himalayana
SHI07963 Sapria himalayana
Solyc04g082590.3 Solanum lycopersicum
Sopen04g036220 Solanum pennellii
Sp1g32030 Schrenkiella parvula
TAR625G1418 Trochodendron aralioides
TAR633G0270 Trochodendron aralioides
THA.LOC104806916 Tarenaya hassleriana
Thecc.08G062700 Theobroma cacao
Thhalv10004993m.g Eutrema salsugineum
TPR.G38107 Trifolium pratense
TWI36G0062 Tripterygium wilfordii
unitig_749.g13890 Utricularia gibba
vmacro21785 Vaccinium macrocarpon
VMungo1309G2102 Vigna mungo
Zm00001eb209390 Zea mays

User provided reference genes

Program Settings