Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p11460 Brassica napus
A07p19740 Brassica napus
Aa31LG9G17040 Aethionema arabicum
Actinidia17627 Actinidia chinensis
Actinidia26295 Actinidia chinensis
Actinidia26317 Actinidia chinensis
Actinidia26318 Actinidia chinensis
AL7G52060 Arabidopsis lyrata
Aqoxy3G00357 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.Q5MPVN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SDSH2P Arachis hypogaea
AT5G38510 Arabidopsis thaliana
Atru.chr8.853 Acer truncatum
AUR62008968 Chenopodium quinoa
AUR62014535 Chenopodium quinoa
BcaB02g08005 Brassica carinata
BcaB06g27227 Brassica carinata
BcaC02g09651 Brassica carinata
BcaC08g44383 Brassica carinata
BolC4t26095H Brassica oleracea
BolC6t37025H Brassica oleracea
BraA04t16811Z Brassica rapa
BraA07t29674Z Brassica rapa
C04p45150 Brassica napus
C06p18160 Brassica napus
CAN.G358.138 Capsicum annuum
CANSAT64G2504 Cannabis sativa
CARHR213910 Cardamine hirsuta
Carub.0007s3740 Capsella rubella
Ca_27453_v3 Cicer arietinum L.
Cc07_g08970 Coffea canephora
CDE08G0058 Ceratophyllum demersum
Cfa007942 Carpinus fangiana
Ciclev10011658m.g Citrus clementina
CiPaw.03G060000 Carya illinoinensis
ClCG07G016280 Citrullus lanatus
COL.COLO4_16189 Corchorus olitorius
Cpa.g.sc179.20 Carica papaya
CsaV3_4G008810 Cucumis sativus L.
DCAR_017209 Daucus carota
Dinv34844 Davidia involucrata
Duzib268G1766 Durio zibethinus
ECA238G4322 Erigeron canadensis
EL10Ac2g04602 Beta vulgaris
Eucgr.J01471 Eucalyptus grandis
FAN05G2172 Fragaria x ananassa
FAN09G0597 Fragaria x ananassa
FAN09G0764 Fragaria x ananassa
FAN14G1925 Fragaria x ananassa
FvH4_6g45321 Fragaria vesca
Glyma.13G046700 Glycine max
Glyma.19G045800 Glycine max
Gohir.A11G162600 Gossypium hirsutum
Gohir.D11G169050 Gossypium hirsutum
Gohir.D11G169100 Gossypium hirsutum
Gorai.007G180600 Gossypium raimondii
GSVIVG01031073001 Vitis vinifera
HanXRQChr14g0440971 Helianthus annuus
Haze_14133 Corylus avellana
Hma1.2p1_0136F.1_g062110 Hydrangea macrophylla
Hma1.2p1_0136F.1_g062120 Hydrangea macrophylla
Hund13731 Selenicereus undatus
Lalb_Chr02g0158301 Lupinus albus
Lj2A446T49 Lonicera japonica
Lj2g0026211 Lotus japonicus
Lsat_1_v5_gn_2_79721 Lactuca sativa
Manes.02G066900 Manihot esculenta
Mapoly0336s0001 Marchantia polymorpha
MBI09_g05205_MAGBIO Magnolia biondii
MD09G1085700 Malus domestica
MD17G1074600 Malus domestica
Medtr0024s0260 Medicago truncatula
MELO3C018937.2 Cucumis melo
Migut.H00202 Erythranthe guttata
MSTRG.2776 Avicennia marina
Nitab4.5_0004118g0120 Nicotiana tabacum
Nitab4.5_0008781g0010 Nicotiana tabacum
Nn4g23751 Nelumbo nucifera
Os02g0326700 Oryza sativa ssp. japonica
Peaxi162Scf01327g00137 Petunia axillaris
PGR042G1577 Punica granatum
PGSC0003DMG400012677 Solanum tuberosum
Phvul.004G063600 Phaseolus vulgaris
Potri.012G019350 Populus trichocarpa
Potri.017G112900 Populus trichocarpa
Pp3c19_20960 Physcomitrium patens
Pp3c22_8560 Physcomitrium patens
Prupe.3G239300 Prunus persica
Psat1g080240 Pisum sativum
QL02p051504 Quercus lobata
RcHm_v2.0_Chr2g0163101 Rosa chinensis
Rhsim08G0081400 Rhododendron simsii
Sabra17G0093600 Salix brachista
SalBow3G2350 Salvia bowleyana
Sed0020279 Sechium edule
SMO147G0046 Selaginella moellendorffii
SMO361G0424 Selaginella moellendorffii
SMO361G0689 Selaginella moellendorffii
Solyc02g085760.2 Solanum lycopersicum
Sopen02g030450 Solanum pennellii
Sp7g03560 Schrenkiella parvula
TAR371G1142 Trochodendron aralioides
THA.LOC104823866 Tarenaya hassleriana
Thecc.04G137100 Theobroma cacao
Thhalv10027755m.g Eutrema salsugineum
TPR.G16968 Trifolium pratense
TPR.G32456 Trifolium pratense
TPR.G32464 Trifolium pratense
TWI53G1784 Tripterygium wilfordii
unitig_62.g23452 Utricularia gibba
unitig_65.g29881 Utricularia gibba
vmacro18085 Vaccinium macrocarpon
VMungo0464G1783 Vigna mungo
Zm00001eb204300 Zea mays

User provided reference genes

Program Settings