Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG9G230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis
Actinidia22202 Actinidia chinensis
Ah.07g197890 Amaranthus hybridus
AL7G47260 Arabidopsis lyrata
Aqoxy5G04260 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea
AT5G41960 Arabidopsis thaliana
ATR0620G109 Amborella trichopoda
Atru.chr9.1899 Acer truncatum
AUR62007045 Chenopodium quinoa
AUR62019909 Chenopodium quinoa
BolC6t37216H Brassica oleracea
CAN.G567.80 Capsicum annuum
CANSAT21G1603 Cannabis sativa
CARHR212600 Cardamine hirsuta
Carub.0007s3342 Capsella rubella
Ca_24467_v3 Cicer arietinum L.
CBR_g26222 Chara braunii
Cc08_g16690 Coffea canephora
CDE07G1000 Ceratophyllum demersum
Cfa011932 Carpinus fangiana
Ciclev10021806m.g Citrus clementina
CiPaw.12G078100 Carya illinoinensis
ClCG01G001570 Citrullus lanatus
Cpa.g.sc175.19 Carica papaya
Cre03.g148350 Chlamydomonas reinhardtii
CsaV3_5G001730 Cucumis sativus L.
CSS0028177 Camellia sinensis var. sinensis
DCAR_006538 Daucus carota
Dinv12013 Davidia involucrata
Dinv34693 Davidia involucrata
Duzib205G1809 Durio zibethinus
ECA246G5308 Erigeron canadensis
EL10Ac5g12439 Beta vulgaris
Eucgr.D01686 Eucalyptus grandis
FAN04G1313 Fragaria x ananassa
FAN08G2008 Fragaria x ananassa
FAN13G1076 Fragaria x ananassa
FAN18G1330 Fragaria x ananassa
FvH4_5g11000 Fragaria vesca
Glyma.01G230300 Glycine max
Gohir.A02G097900 Gossypium hirsutum
Gohir.D03G085700 Gossypium hirsutum
Gorai.003G076500 Gossypium raimondii
GSVIVG01019642001 Vitis vinifera
HanXRQChr06g0166831 Helianthus annuus
HanXRQChr17g0534751 Helianthus annuus
Haze_09158 Corylus avellana
Haze_09164 Corylus avellana
Haze_14080 Corylus avellana
HPP92_022341 Vanilla planifolia
HPP92_022355 Vanilla planifolia
Hund14199 Selenicereus undatus
Lalb_Chr09g0320381 Lupinus albus
LjContig00222g0018079 Lotus japonicus
Lsat_1_v5_gn_3_13941 Lactuca sativa
Lsat_1_v5_gn_3_14061 Lactuca sativa
Manes.02G003500 Manihot esculenta
Mapoly0080s0071 Marchantia polymorpha
MBI04_g33411_MAGBIO Magnolia biondii
MD06G1117700 Malus domestica
MD14G1125100 Malus domestica
MD16G1274000 Malus domestica
Medtr5g008220 Medicago truncatula
MELO3C005780.2 Cucumis melo
Migut.O00796 Erythranthe guttata
MSTRG.15575 Avicennia marina
Nitab4.5_0000051g0070 Nicotiana tabacum
Nitab4.5_0002582g0050 Nicotiana tabacum
Nitab4.5_0004251g0050 Nicotiana tabacum
Nitab4.5_0007063g0030 Nicotiana tabacum
Nn3g18888 Nelumbo nucifera
Oeu022037.1 Olea europaea
Os04g0585600 Oryza sativa ssp. japonica
PGR031G1249 Punica granatum
PGSC0003DMG400012122 Solanum tuberosum
Phvul.002G036800 Phaseolus vulgaris
Potri.001G084600 Populus trichocarpa
Potri.003G146100 Populus trichocarpa
Pp3c14_22240 Physcomitrium patens
Prupe.5G128800 Prunus persica
Psat2g187480 Pisum sativum
PSO339G2192 Papaver somniferum
PSO339G4063 Papaver somniferum
QL02p028324 Quercus lobata
RcHm_v2.0_Chr7g0186811 Rosa chinensis
Rhsim02G0251600 Rhododendron simsii
Sabra03G0106200 Salix brachista
Sc01g0010620 Simmondsia chinensis
Sed0027229 Sechium edule
SEGI_07436 Sequoiadendron giganteum
SEGI_36842 Sequoiadendron giganteum
SGA_v2.0_scaffold314G48366 Striga asiatica
SMO164G0130 Selaginella moellendorffii
Solyc08g083030.4 Solanum lycopersicum
Sopen08g031240 Solanum pennellii
Sp7g00170 Schrenkiella parvula
TAR375G0929 Trochodendron aralioides
TAR622G0501 Trochodendron aralioides
THA.LOC104809306 Tarenaya hassleriana
Thecc.03G221900 Theobroma cacao
Thhalv10027936m.g Eutrema salsugineum
TPR.G22067 Trifolium pratense
TPR.G38026 Trifolium pratense
TWI15G0571 Tripterygium wilfordii
TWI81G0911 Tripterygium wilfordii
unitig_62.g23644 Utricularia gibba
vmacro11507 Vaccinium macrocarpon
VMungo1215G3083 Vigna mungo
Zm00001eb428160 Zea mays

User provided reference genes

Program Settings