Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G20970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4393 Anthoceros agrestis
Actinidia30478 Actinidia chinensis
AL1G13150 Arabidopsis lyrata
Aqoxy4G01010 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1ZYA2W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.THUB96 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UXPW02 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YPG8JQ Arachis hypogaea
AT1G03650 Arabidopsis thaliana
ATR0680G283 Amborella trichopoda
AUR62037369 Chenopodium quinoa
BcaC07g42236 Brassica carinata
BcaC07g42241 Brassica carinata
BcaC07g42250 Brassica carinata
BcaC07g42259 Brassica carinata
BolC8t52799H Brassica oleracea
BraA09t42163Z Brassica rapa
C08p52730 Brassica napus
C08p52830 Brassica napus
CAN.G486.11 Capsicum annuum
CANSAT78G1474 Cannabis sativa
CARHR002980 Cardamine hirsuta
Carub.0001s0276 Capsella rubella
Ca_28202_v3 Cicer arietinum L.
Cc05_g06870 Coffea canephora
CDE02G4296 Ceratophyllum demersum
Cfa014594 Carpinus fangiana
Ciclev10022606m.g Citrus clementina
Ciclev10022631m.g Citrus clementina
Ciclev10023600m.g Citrus clementina
CiPaw.03G175500 Carya illinoinensis
ClCG02G017580 Citrullus lanatus
COL.COLO4_07554 Corchorus olitorius
Cpa.g.sc34.144 Carica papaya
Cre17.g705950 Chlamydomonas reinhardtii
CsaV3_6G013010 Cucumis sativus L.
CSS0024097 Camellia sinensis var. sinensis
DCAR_013001 Daucus carota
Dinv02170 Davidia involucrata
Duzib052G1001 Durio zibethinus
EL10Ac9g20747 Beta vulgaris
FAN15G2141 Fragaria x ananassa
FAN24G2354 Fragaria x ananassa
FAN27G2134 Fragaria x ananassa
FvH4_2g15130 Fragaria vesca
Glyma.06G293600 Glycine max
Glyma.12G111800 Glycine max
Gohir.A13G056000 Gossypium hirsutum
Gohir.D13G066000 Gossypium hirsutum
Gorai.013G075300 Gossypium raimondii
GSVIVG01030373001 Vitis vinifera
HanXRQChr17g0553541 Helianthus annuus
Haze_13147 Corylus avellana
Hma1.2p1_1201F.1_g266700 Hydrangea macrophylla
HPP92_002954 Vanilla planifolia
Hund01169 Selenicereus undatus
Lalb_Chr01g0005301 Lupinus albus
Lj3g0024821 Lotus japonicus
Lj8A113T47 Lonicera japonica
Lsat_1_v5_gn_8_132641 Lactuca sativa
Lsat_1_v5_gn_8_133041 Lactuca sativa
Manes.12G090900 Manihot esculenta
Mapoly0101s0002 Marchantia polymorpha
MBI17_g43194_MAGBIO Magnolia biondii
MD09G1249800 Malus domestica
Medtr4g046047 Medicago truncatula
MELO3C013609.2 Cucumis melo
MELO3C024591.2 Cucumis melo
Migut.H01076 Erythranthe guttata
MSTRG.12316 Avicennia marina
Nitab4.5_0002575g0020 Nicotiana tabacum
Nitab4.5_0003022g0100 Nicotiana tabacum
Nn1g06593 Nelumbo nucifera
Oeu029922.1 Olea europaea
Os10g0500400 Oryza sativa ssp. japonica
Peaxi162Scf02133g00022 Petunia axillaris
PGSC0003DMG400007866 Solanum tuberosum
PGSC0003DMG400007868 Solanum tuberosum
Phvul.011G117200 Phaseolus vulgaris
Potri.013G134000 Populus trichocarpa
Potri.013G134102 Populus trichocarpa
Pp3c2_27490 Physcomitrium patens
Pp3s32_550 Physcomitrium patens
PRCOL_00005877 Prasinoderma coloniale
Prupe.3G155400 Prunus persica
Psat7g157760 Pisum sativum
PSO210G2618 Papaver somniferum
PSO832G4125 Papaver somniferum
QL08p038417 Quercus lobata
QL12p004320 Quercus lobata
RcHm_v2.0_Chr6g0277731 Rosa chinensis
Rhsim04G0068000 Rhododendron simsii
Sabra13G0113800 Salix brachista
SalBow1G7232 Salvia bowleyana
SalBow1G7442 Salvia bowleyana
Sc21g0002660 Simmondsia chinensis
Sed0017748 Sechium edule
SGA_v2.0_scaffold307G48064 Striga asiatica
Solyc12g010680.3 Solanum lycopersicum
Sopen12g005310 Solanum pennellii
Sp1g02550 Schrenkiella parvula
TAR629G1268 Trochodendron aralioides
THA.LOC104801176 Tarenaya hassleriana
Thecc.02G177900 Theobroma cacao
Thhalv10008981m.g Eutrema salsugineum
TPR.G21768 Trifolium pratense
TWI36G0686 Tripterygium wilfordii
TWI36G1550 Tripterygium wilfordii
unitig_21.g20401 Utricularia gibba
vmacro09278 Vaccinium macrocarpon
VMungo1127G0420 Vigna mungo
Zm00001eb044400 Zea mays
Zm00001eb044470 Zea mays

User provided reference genes

Program Settings