Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p28310 Brassica napus
Aa31LG8G7290 Aethionema arabicum
Actinidia05088 Actinidia chinensis
Ah.06g182900 Amaranthus hybridus
AL3G34260 Arabidopsis lyrata
Aqoxy1G02096 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea
AT3G20480 Arabidopsis thaliana
ATR0794G085 Amborella trichopoda
Atru.chr2.3453 Acer truncatum
AUR62015801 Chenopodium quinoa
AUR62020414 Chenopodium quinoa
BcaB07g30535 Brassica carinata
BcaC03g16648 Brassica carinata
BolC2t10525H Brassica oleracea
BraA02t07867Z Brassica rapa
C02p44890 Brassica napus
CAN.G337.80 Capsicum annuum
CANSAT11G0669 Cannabis sativa
CARHR096240 Cardamine hirsuta
Carub.0003s2044 Capsella rubella
Ca_14746_v3 Cicer arietinum L.
CBR_g39764 Chara braunii
Cc05_g13940 Coffea canephora
CDE05G3055 Ceratophyllum demersum
Cfa020325 Carpinus fangiana
Ciclev10008561m.g Citrus clementina
CiPaw.12G131100 Carya illinoinensis
ClCG09G010880 Citrullus lanatus
COL.COLO4_09677 Corchorus olitorius
Cpa.g.sc12.289 Carica papaya
CsaV3_7G021910 Cucumis sativus L.
CSS0027260 Camellia sinensis var. sinensis
DCAR_012723 Daucus carota
Dinv22254 Davidia involucrata
Duzib213G0396 Durio zibethinus
ECA240G2937 Erigeron canadensis
EL10Ac4g07781 Beta vulgaris
Eucgr.F03478 Eucalyptus grandis
FAN11G2199 Fragaria x ananassa
FAN16G0901 Fragaria x ananassa
FAN16G1225 Fragaria x ananassa
FvH4_3g19730 Fragaria vesca
Glyma.08G318300 Glycine max
Glyma.18G095150 Glycine max
Glyma.18G095300 Glycine max
Gohir.A01G080900 Gossypium hirsutum
Gohir.D01G068100 Gossypium hirsutum
Gorai.002G090100 Gossypium raimondii
GSVIVG01037670001 Vitis vinifera
HanXRQChr03g0076401 Helianthus annuus
Haze_09698 Corylus avellana
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla
HPP92_012407 Vanilla planifolia
Hund01977 Selenicereus undatus
Lalb_Chr18g0049881 Lupinus albus
Lj1A874G27 Lonicera japonica
Lj6g0002864 Lotus japonicus
Lsat_1_v5_gn_9_93121 Lactuca sativa
Manes.15G070387 Manihot esculenta
Mapoly0002s0307 Marchantia polymorpha
MD11G1215400 Malus domestica
Medtr0152s0030 Medicago truncatula
Medtr0152s0050 Medicago truncatula
Medtr3g052590 Medicago truncatula
MELO3C013155.2 Cucumis melo
MELO3C025412.2 Cucumis melo
MELO3C029511.2 Cucumis melo
MELO3C029866.2 Cucumis melo
MELO3C029988.2 Cucumis melo
Migut.H01815 Erythranthe guttata
MSTRG.14440 Avicennia marina
Nitab4.5_0002287g0070 Nicotiana tabacum
Nitab4.5_0005590g0010 Nicotiana tabacum
Nn1g07163 Nelumbo nucifera
Oeu034036.2 Olea europaea
Os07g0102000 Oryza sativa ssp. japonica
Peaxi162Scf00235g00319 Petunia axillaris
PGSC0003DMG400022313 Solanum tuberosum
Phvul.006G045700 Phaseolus vulgaris
Potri.001G418800 Populus trichocarpa
Pp3c19_1630 Physcomitrium patens
Prupe.4G215900 Prunus persica
Psat5g177160 Pisum sativum
PSO541G1885 Papaver somniferum
PSO675G8214 Papaver somniferum
QL08p009594 Quercus lobata
RcHm_v2.0_Chr4g0424981 Rosa chinensis
RcHm_v2.0_Chr5g0033071 Rosa chinensis
Rhsim06G0218600 Rhododendron simsii
Rhsim06G0218700 Rhododendron simsii
Sabra16G0284300 Salix brachista
Sc16g0005930 Simmondsia chinensis
Sed0023076 Sechium edule
SEGI_13858 Sequoiadendron giganteum
SEGI_14581 Sequoiadendron giganteum
SGA_v2.0_scaffold363G49936 Striga asiatica
SMO367G1261 Selaginella moellendorffii
Solyc07g064710.3 Solanum lycopersicum
Sopen07g032910 Solanum pennellii
Sp2g09120 Schrenkiella parvula
TAR624G0955 Trochodendron aralioides
THA.LOC104825406 Tarenaya hassleriana
Thecc.07G033700 Theobroma cacao
Thhalv10020871m.g Eutrema salsugineum
TPR.G33766 Trifolium pratense
TWI34G0353 Tripterygium wilfordii
TWI38G0247 Tripterygium wilfordii
vmacro02226 Vaccinium macrocarpon
VMungo0540G0725 Vigna mungo
Zm00001eb030810 Zea mays
Zm00001eb030850 Zea mays

User provided reference genes

Program Settings