Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00280 Brassica napus
Aa31LG1G23130 Aethionema arabicum
Actinidia11591 Actinidia chinensis
Actinidia11592 Actinidia chinensis
Actinidia11593 Actinidia chinensis
Actinidia29099 Actinidia chinensis
Ah.02g115880 Amaranthus hybridus
AL6G10540 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.BVC6L3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T1PXLY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2B821 Arachis hypogaea
AT5G01510 Arabidopsis thaliana
ATR0618G035 Amborella trichopoda
Atru.chr8.2235 Acer truncatum
AUR62010465 Chenopodium quinoa
AUR62030448 Chenopodium quinoa
BcaB01g06100 Brassica carinata
BcaB01g06231 Brassica carinata
BolC3t12610H Brassica oleracea
BraA03t09419Z Brassica rapa
C03p00450 Brassica napus
CAN.G5.36 Capsicum annuum
CARHR211870 Cardamine hirsuta
Carub.0006s0032 Capsella rubella
Ca_07634_v3 Cicer arietinum L.
Cc06_g01420 Coffea canephora
CDE02G1196 Ceratophyllum demersum
Ciclev10013484m.g Citrus clementina
CiPaw.09G208900 Carya illinoinensis
ClCG04G007040 Citrullus lanatus
COL.COLO4_14541 Corchorus olitorius
Cpa.g.sc11.163 Carica papaya
Cpa.g.sc11.164 Carica papaya
CsaV3_4G026230 Cucumis sativus L.
CSS0015389 Camellia sinensis var. sinensis
DCAR_015423 Daucus carota
Dinv23100 Davidia involucrata
Duzib093G0110 Durio zibethinus
ECA236G2421 Erigeron canadensis
EL10Ac5g12569 Beta vulgaris
Eucgr.A00504 Eucalyptus grandis
FAN02G1380 Fragaria x ananassa
FAN05G3292 Fragaria x ananassa
FAN05G3789 Fragaria x ananassa
FAN09G3623 Fragaria x ananassa
FAN14G1027 Fragaria x ananassa
FAN14G1400 Fragaria x ananassa
FvH4_6g11500 Fragaria vesca
FvH4_6g42101 Fragaria vesca
Glyma.07G149032 Glycine max
Glyma.07G149300 Glycine max
Glyma.18G200200 Glycine max
Gohir.A04G089800 Gossypium hirsutum
Gohir.D04G129900 Gossypium hirsutum
Gorai.012G113400 Gossypium raimondii
GSVIVG01033964001 Vitis vinifera
HanXRQChr11g0331611 Helianthus annuus
Haze_20998 Corylus avellana
HPP92_005562 Vanilla planifolia
Hund11016 Selenicereus undatus
Hund11018 Selenicereus undatus
Lalb_Chr19g0124501 Lupinus albus
Lalb_Chr19g0124511 Lupinus albus
Lj1g0008116 Lotus japonicus
Lj3A954T63 Lonicera japonica
Lj3A954T64 Lonicera japonica
Lsat_1_v5_gn_3_105101 Lactuca sativa
Lsat_1_v5_gn_3_30860 Lactuca sativa
Lsat_1_v5_gn_3_64800 Lactuca sativa
Lsat_1_v5_gn_8_102220 Lactuca sativa
Manes.09G104000 Manihot esculenta
Mapoly0076s0023 Marchantia polymorpha
MBI14_g31684_MAGBIO Magnolia biondii
Medtr7g068310 Medicago truncatula
MELO3C003296.2 Cucumis melo
Migut.J00176 Erythranthe guttata
Migut.J00177 Erythranthe guttata
MSTRG.5578 Avicennia marina
Nitab4.5_0000335g0230 Nicotiana tabacum
Nitab4.5_0000511g0110 Nicotiana tabacum
Nn2g11475 Nelumbo nucifera
Oeu064505.1 Olea europaea
Os01g0141600 Oryza sativa ssp. japonica
Peaxi162Scf00141g00921 Petunia axillaris
PGSC0003DMG400011791 Solanum tuberosum
Phvul.008G104800 Phaseolus vulgaris
Potri.006G099700 Populus trichocarpa
Prupe.6G276600 Prunus persica
Psat3g129840 Pisum sativum
PSO339G1757 Papaver somniferum
PSO384G0643 Papaver somniferum
QL07p035783 Quercus lobata
RcHm_v2.0_Chr3g0463211 Rosa chinensis
Rhsim05G0214600 Rhododendron simsii
Sabra06G0076600 Salix brachista
SalBow5G0518 Salvia bowleyana
Sc01g0006480 Simmondsia chinensis
Sed0008022 Sechium edule
SEGI_37921 Sequoiadendron giganteum
SEGI_37959 Sequoiadendron giganteum
SGA_v2.0_scaffold85G26741 Striga asiatica
SMO367G1276 Selaginella moellendorffii
Solyc09g005230.3 Solanum lycopersicum
Sopen09g001210 Solanum pennellii
Sp6g40790 Schrenkiella parvula
TAR623G0543 Trochodendron aralioides
THA.LOC104823299 Tarenaya hassleriana
Thecc.05G016700 Theobroma cacao
Thhalv10013293m.g Eutrema salsugineum
TPR.G34596 Trifolium pratense
TWI77G0287 Tripterygium wilfordii
unitig_8.g3230 Utricularia gibba
vmacro20260 Vaccinium macrocarpon
VMungo1383G2262 Vigna mungo

User provided reference genes

Program Settings