Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia00536 Actinidia chinensis
Actinidia36006 Actinidia chinensis
Ah.01g019240 Amaranthus hybridus
Aqoxy5G01586 Aquilegia oxysepala
Aqoxy6G01158 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I3TCZM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M1RWF9 Arachis hypogaea
ATR0568G035 Amborella trichopoda
Atru.chr5.3047 Acer truncatum
AUR62011300 Chenopodium quinoa
AUR62016758 Chenopodium quinoa
Ca_20889_v3 Cicer arietinum L.
Cc02_g17350 Coffea canephora
CDE04G2987 Ceratophyllum demersum
CDE05G0774 Ceratophyllum demersum
CDE06G0685 Ceratophyllum demersum
CDE11G0435 Ceratophyllum demersum
Cfa004981 Carpinus fangiana
Ciclev10027908m.g Citrus clementina
CiPaw.05G066600 Carya illinoinensis
CiPaw.06G134300 Carya illinoinensis
ClCG11G004280 Citrullus lanatus
COL.COLO4_25959 Corchorus olitorius
Cpa.g.sc17.13 Carica papaya
CsaV3_2G014890 Cucumis sativus L.
CSS0022058 Camellia sinensis var. sinensis
DCAR_001566 Daucus carota
DCAR_028976 Daucus carota
Dinv23502 Davidia involucrata
Duzib052G0704 Durio zibethinus
Duzib132G0641 Durio zibethinus
ECA240G0129 Erigeron canadensis
EL10Ac9g21706 Beta vulgaris
Eucgr.G01689 Eucalyptus grandis
FAN15G3137 Fragaria x ananassa
FAN24G0234 Fragaria x ananassa
FAN27G0151 Fragaria x ananassa
FvH4_2g09190 Fragaria vesca
Glyma.11G116700 Glycine max
Glyma.12G042500 Glycine max
Gohir.A12G029800 Gossypium hirsutum
Gohir.D12G029100 Gossypium hirsutum
Gorai.008G029800 Gossypium raimondii
GSVIVG01023803001 Vitis vinifera
HanXRQChr03g0074191 Helianthus annuus
Haze_02407 Corylus avellana
HPP92_020281 Vanilla planifolia
HPP92_021324 Vanilla planifolia
Hund06244 Selenicereus undatus
Lalb_Chr01g0002461 Lupinus albus
Lalb_Chr03g0025591 Lupinus albus
Lalb_Chr19g0138701 Lupinus albus
Lj3g0024948 Lotus japonicus
Lsat_1_v5_gn_9_108461 Lactuca sativa
Manes.04G089500 Manihot esculenta
Manes.11G085600 Manihot esculenta
MBI10_g06730_MAGBIO Magnolia biondii
MBI16_g08804_MAGBIO Magnolia biondii
MBI16_g35576_MAGBIO Magnolia biondii
MD05G1064100 Malus domestica
MD10G1072800 Malus domestica
Medtr4g070420 Medicago truncatula
MELO3C023308.2 Cucumis melo
Migut.B00223 Erythranthe guttata
Migut.N01249 Erythranthe guttata
Nitab4.5_0000308g0260 Nicotiana tabacum
Nitab4.5_0007728g0020 Nicotiana tabacum
Nitab4.5_0007728g0030 Nicotiana tabacum
Nitab4.5_0008874g0010 Nicotiana tabacum
Nitab4.5_0009972g0010 Nicotiana tabacum
Nn1g04928 Nelumbo nucifera
Nn5g29665 Nelumbo nucifera
Oeu029153.2 Olea europaea
Oeu055597.1 Olea europaea
Peaxi162Scf00003g01121 Petunia axillaris
Peaxi162Scf00016g00623 Petunia axillaris
PGR042G0047 Punica granatum
PGSC0003DMG400000714 Solanum tuberosum
PGSC0003DMG400007729 Solanum tuberosum
Phvul.011G044100 Phaseolus vulgaris
Potri.004G157000 Populus trichocarpa
Potri.009G118651 Populus trichocarpa
Prupe.8G094200 Prunus persica
Psat7g184200 Pisum sativum
PSO170G6310 Papaver somniferum
PSO675G1875 Papaver somniferum
PSO764G0276 Papaver somniferum
QL11p044451 Quercus lobata
RcHm_v2.0_Chr6g0265031 Rosa chinensis
Rhsim11G0179000 Rhododendron simsii
Sabra04G0104900 Salix brachista
Sabra09G0090900 Salix brachista
SalBow3G2815 Salvia bowleyana
SalBow6G2324 Salvia bowleyana
Sc08g0000600 Simmondsia chinensis
Sed0007775 Sechium edule
SEGI_13389 Sequoiadendron giganteum
SGA_v2.0_scaffold125G33736 Striga asiatica
Solyc01g109780.3 Solanum lycopersicum
Solyc10g052650.3 Solanum lycopersicum
Sopen01g051970 Solanum pennellii
Sopen10g023370 Solanum pennellii
TAR376G0762 Trochodendron aralioides
THA.LOC104804555 Tarenaya hassleriana
THA.LOC104807308 Tarenaya hassleriana
Thecc.02G082800 Theobroma cacao
TPR.G22545 Trifolium pratense
TWI31G1402 Tripterygium wilfordii
TWI79G0124 Tripterygium wilfordii
unitig_37.g12820 Utricularia gibba
unitig_699.g19881 Utricularia gibba
vmacro02090 Vaccinium macrocarpon
VMungo0251G2908 Vigna mungo
VMungo1127G1486 Vigna mungo

User provided reference genes

Program Settings