Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p35400 Brassica napus
A06p41260 Brassica napus
Aa31LG2G5380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2114 Anthoceros agrestis
Actinidia18425 Actinidia chinensis
AL5G16660 Arabidopsis lyrata
Aqoxy1G01464 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.24IP75 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5E1CRJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W3WD4H Arachis hypogaea
AT3G27340 Arabidopsis thaliana
ATR1089G022 Amborella trichopoda
Atru.chr6.2476 Acer truncatum
AUR62015328 Chenopodium quinoa
BcaB01g01217 Brassica carinata
BcaC06g31012 Brassica carinata
BolC2t11473H Brassica oleracea
BolC7t44158H Brassica oleracea
BraA02t08541Z Brassica rapa
BraA06t27050Z Brassica rapa
C02p54110 Brassica napus
C07p36390 Brassica napus
CAN.G473.52 Capsicum annuum
CANSAT64G0830 Cannabis sativa
CARHR148660 Cardamine hirsuta
Carub.0005s0564 Capsella rubella
Ca_14748_v3 Cicer arietinum L.
Cc07_g00360 Coffea canephora
CDE04G0536 Ceratophyllum demersum
CDE07G0016 Ceratophyllum demersum
Cfa010438 Carpinus fangiana
Ciclev10017134m.g Citrus clementina
CiPaw.13G047700 Carya illinoinensis
ClCG05G013170 Citrullus lanatus
COL.COLO4_29265 Corchorus olitorius
COL.COLO4_29269 Corchorus olitorius
Cpa.g.sc130.46 Carica papaya
Cre09.g413300 Chlamydomonas reinhardtii
CsaV3_3G027380 Cucumis sativus L.
DCAR_011285 Daucus carota
Dinv25701 Davidia involucrata
Dinv33390 Davidia involucrata
Duzib147G0953 Durio zibethinus
ECA232G0345 Erigeron canadensis
EL10Ac3g06878 Beta vulgaris
Eucgr.I01699 Eucalyptus grandis
FAN02G1980 Fragaria x ananassa
FAN05G2331 Fragaria x ananassa
FAN14G5586 Fragaria x ananassa
FvH4_6g52430 Fragaria vesca
Glyma.08G318800 Glycine max
Gohir.A07G225400 Gossypium hirsutum
Gohir.D07G232600 Gossypium hirsutum
Gorai.001G267900 Gossypium raimondii
GSVIVG01003966001 Vitis vinifera
HanXRQChr09g0255661 Helianthus annuus
Haze_03392 Corylus avellana
Haze_03396 Corylus avellana
HPP92_007225 Vanilla planifolia
Hund25052 Selenicereus undatus
Lalb_Chr20g0116091 Lupinus albus
Lj6g0003593 Lotus japonicus
Lsat_1_v5_gn_4_184841 Lactuca sativa
Manes.15G155800 Manihot esculenta
Mapoly0001s0548 Marchantia polymorpha
MBI06_g05240_MAGBIO Magnolia biondii
MBI06_g43854_MAGBIO Magnolia biondii
MD09G1018100 Malus domestica
Medtr1252s0010 Medicago truncatula
Medtr3g052740 Medicago truncatula
MELO3C014841.2 Cucumis melo
Migut.H00050 Erythranthe guttata
MSTRG.3117 Avicennia marina
Nitab4.5_0000040g0550 Nicotiana tabacum
Nitab4.5_0005414g0020 Nicotiana tabacum
Nn5g27086 Nelumbo nucifera
Os01g0904300 Oryza sativa ssp. japonica
Os02g0197800 Oryza sativa ssp. japonica
Peaxi162Scf00080g01715 Petunia axillaris
PGR142G0400 Punica granatum
PGSC0003DMG400012647 Solanum tuberosum
Phvul.006G045900 Phaseolus vulgaris
Potri.001G336600 Populus trichocarpa
Pp3c11_10070 Physcomitrium patens
Pp3c11_10230 Physcomitrium patens
Pp3c11_9830 Physcomitrium patens
Psat5g174840 Pisum sativum
PSO063G6009 Papaver somniferum
PSO782G5351 Papaver somniferum
QL02p001451 Quercus lobata
RcHm_v2.0_Chr2g0174071 Rosa chinensis
Sabra16G0217400 Salix brachista
SalBow2G0885 Salvia bowleyana
SalBow2G2409 Salvia bowleyana
Sc03g0006900 Simmondsia chinensis
Sc03g0007000 Simmondsia chinensis
Sed0003364 Sechium edule
Sed0018714 Sechium edule
Sed0022519 Sechium edule
SGA_v2.0_scaffold135G34933 Striga asiatica
SHI03852 Sapria himalayana
SMO364G0335 Selaginella moellendorffii
Solyc02g093730.4 Solanum lycopersicum
Sp2g16530 Schrenkiella parvula
TAR371G1002 Trochodendron aralioides
THA.LOC104823962 Tarenaya hassleriana
THA.LOC104823963 Tarenaya hassleriana
Thecc.04G025300 Theobroma cacao
Thhalv10005152m.g Eutrema salsugineum
TPR.G33763 Trifolium pratense
TPR.G39742 Trifolium pratense
TWI56G1021 Tripterygium wilfordii
vmacro18311 Vaccinium macrocarpon
VMungo0540G0081 Vigna mungo
Zm00001eb144320 Zea mays

User provided reference genes

Program Settings